Gene PICST_42671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_42671 
Symbol 
ID4836881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp622695 
End bp623459 
Gene Length765 bp 
Protein Length255 aa 
Translation table12 
GC content36% 
IMG OID640388196 
Productpredicted protein 
Protein accessionXP_001382356 
Protein GI126131662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.151772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AATGTCCGCA ACCTACGTCT TTTTGGAAAA TGTTTCCTAG AAAGTGAAGG TCAATTACCA 
AAATATCTAA GTATCCTAGA GAAGGGGCTT CTACCAATTT TTTCACGAAA TCCACCAAAG
TTTATGAAAT GGGACGGTCA AGAGTTTAAC TTACTTTCGA CAAAGGAATC GACTTCTTCT
ACAGAACGTG AATCGAATGA AAGGTTTTGT TTTTGGAAAG AAGTCTTGAA AAGTATGAGT
GGATCTGGAA TAGTAGTGAG TGCTAGTGAT CAACAAGTAA CTGAGGTGAT GAATTTGCTT
AAAGTTCTTC GTTTTCTTGA AAATGAATTA CCAATTCAAA TAGTTCATAA GGGGGATCTT
AATCGGGATT CTCAAAAAAG GATTATAGAA ATCGGGAGAG GTGTAGACAC TCCTCATGAC
AAATTCAAAC AAAACGTTTG GTTTGTTGAT GTATCCAATT GCTTACACAT AGATCATTTG
AATAAATTTA CTAGATTCAA GAACAAATGG CTCTCTGTTT TGTTCTCCTC ATTCGAGGAA
ATCATTTTAA TGGATGCCGA CACGGTTCCT TTGGTGAAAC CTAGTACACT TCTACAGAAC
GAAAAGTATA AAAGATCTGG AGCGCTTTTC TTTAAGGATA GGGCGTTAAG TGAAACAATA
TGGTCTTCAG AGGTGTACCT TTATAAGTCC TTACTTCCAA ATAATTTAGA ACAAAGAGTG
TTTGGAACTG CACTTCAAAC TAAAACAATC TTCGAAAATA CCTTT
 
Protein sequence
NVRNLRLFGK CFLESEGQLP KYLSILEKGL LPIFSRNPPK FMKWDGQEFN LLSTKESTSS 
TERESNERFC FWKEVLKSMS GSGIVVSASD QQVTEVMNLL KVLRFLENEL PIQIVHKGDL
NRDSQKRIIE IGRGVDTPHD KFKQNVWFVD VSNCLHIDHL NKFTRFKNKW LSVLFSSFEE
IILMDADTVP LVKPSTLLQN EKYKRSGALF FKDRALSETI WSSEVYLYKS LLPNNLEQRV
FGTALQTKTI FENTF