Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_42671 |
Symbol | |
ID | 4836881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 622695 |
End bp | 623459 |
Gene Length | 765 bp |
Protein Length | 255 aa |
Translation table | 12 |
GC content | 36% |
IMG OID | 640388196 |
Product | predicted protein |
Protein accession | XP_001382356 |
Protein GI | 126131662 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.151772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AATGTCCGCA ACCTACGTCT TTTTGGAAAA TGTTTCCTAG AAAGTGAAGG TCAATTACCA AAATATCTAA GTATCCTAGA GAAGGGGCTT CTACCAATTT TTTCACGAAA TCCACCAAAG TTTATGAAAT GGGACGGTCA AGAGTTTAAC TTACTTTCGA CAAAGGAATC GACTTCTTCT ACAGAACGTG AATCGAATGA AAGGTTTTGT TTTTGGAAAG AAGTCTTGAA AAGTATGAGT GGATCTGGAA TAGTAGTGAG TGCTAGTGAT CAACAAGTAA CTGAGGTGAT GAATTTGCTT AAAGTTCTTC GTTTTCTTGA AAATGAATTA CCAATTCAAA TAGTTCATAA GGGGGATCTT AATCGGGATT CTCAAAAAAG GATTATAGAA ATCGGGAGAG GTGTAGACAC TCCTCATGAC AAATTCAAAC AAAACGTTTG GTTTGTTGAT GTATCCAATT GCTTACACAT AGATCATTTG AATAAATTTA CTAGATTCAA GAACAAATGG CTCTCTGTTT TGTTCTCCTC ATTCGAGGAA ATCATTTTAA TGGATGCCGA CACGGTTCCT TTGGTGAAAC CTAGTACACT TCTACAGAAC GAAAAGTATA AAAGATCTGG AGCGCTTTTC TTTAAGGATA GGGCGTTAAG TGAAACAATA TGGTCTTCAG AGGTGTACCT TTATAAGTCC TTACTTCCAA ATAATTTAGA ACAAAGAGTG TTTGGAACTG CACTTCAAAC TAAAACAATC TTCGAAAATA CCTTT
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Protein sequence | NVRNLRLFGK CFLESEGQLP KYLSILEKGL LPIFSRNPPK FMKWDGQEFN LLSTKESTSS TERESNERFC FWKEVLKSMS GSGIVVSASD QQVTEVMNLL KVLRFLENEL PIQIVHKGDL NRDSQKRIIE IGRGVDTPHD KFKQNVWFVD VSNCLHIDHL NKFTRFKNKW LSVLFSSFEE IILMDADTVP LVKPSTLLQN EKYKRSGALF FKDRALSETI WSSEVYLYKS LLPNNLEQRV FGTALQTKTI FENTF
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