| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_42583 |
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| Symbol | NUP116 |
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| ID | 4836889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2106428 |
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| End bp | 2109283 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640388204 |
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| Product | nuclear pore protein |
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| Protein accession | XP_001382631 |
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| Protein GI | 150863970 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTTTTGGCT CGTCAAATAC AGCTGGATCA CCGTTTGGGG GTTCTGGAGC CACTTCCACA
TTCGGGACCG GTACTGGTAC AAATTCTACT TCATTTGGTG CTTCCAATGC GGCTGCAGGT
GGTATTTTCG GCGGTGCTAA CAAATCGGGC TTTGGAGCCT CTACGGGAGC GTTTGGTTCT
GGTGGCACTT CTCCATTTGG AGCTACTTCA GGTACTGGCT TCGGTGGAGT AGGAGGCACT
GTAGATTCTA ATACCAACAA CGGAACAGCC GTAAAGCCGT TTGCAGCTGT TAGCGAAAAG
GACAATACTG GAACTTTGAA CGTTTTCCAG AACATCTGTG CTATGCCTGA GTACAAAAAT
TTTTCGTTTG AAGAGTTGAG ATTGAAAGAT TACGAACAAA ACAGGCGTTA TGGTTCTCAG
AATGCTGCTG GTGCTGCTGG TTCTACAACC GGCGGATTCA GCTTCGGGGC TTCCACCAAT
GCTCCTTCCT CTACTTCTGC ATTTGGTTCT GGTGGACAAA CTGGCTTCGG AGCACAACCT
AACACAGGCC TGGCCTTTGG GTCTTCAGGA GCATTTGGAG CAGGTCAGCC ATCAAGTTCT
CCATTTGCAG CACAATCCAA TACTACAAGC ACCTTTGGCC AGCAACAGCA GAGCTCACCT
TTTGGAGGAG CTGCAGCTGG TGGTTCTGGA TTTGGAACTT CTAATGCAGC TAGTGTTTTT
GGAAGTTCCA ACACTGCTTT TGGTGCCAAT AAGCCGGCTA CAGGGTTTGG AGCCACTGGT
TCTTCATTTG GAAATGCTGG CACTGGCGGA GGTCTCTTTG GTTCTAACAA TGCCAATTCT
AATACTAACG CCAATGCATC TCCTTTTGGA GGTACTGGCA ATACAGCTGG TGGTTTTGGC
CAGACCAGCA ACTCGCCATT TGGCCAAAGC AATACTGGAA ACGCCTTTGG CCAGAGCAAC
ACTGGCAGTT CACCATTTGG AACTCAGAAC AATGCTGGTG GAGGTTTGTT TGGAGGAGCT
CGGAATAACC TATCAAATAG TAATGCTTTT GGAGCCTCCA ACACCAACGC GGGTTTTGGT
GCCTCTTCTA CTGGTGGAGG CTTGTTTGGT GGAGCTCAGA ATACGGCCAG CACCTTTGGT
GCCAATAAAC CTGCTACAGG AGGATTGTTT GGAGGAGCTG GTCAGAGTAA TACTCAAGCA
GGAGGATTAT TTGGACAAAA TAACCAGCAA CAAAATACTT CTGGTGGATT GTTTGGCCAA
AATAACCAAC AACAACAACA ACAAGCATCA GGAGGCTTAT TTGGAGCAAA ACCTGCTGGA
AATACTGGAG GTTTATTTGG TAGTAGTCAG ACTTCTAACA CAGCTACTGG CGGAGGTTTG
TTTGGTGGTA ATACCAATCA ATCTGGAGCT GGTGGTTTAT TTGGAGCCAA AACTAATACA
AGTGGTGGTT TATTTGGAGC ATCGCAGCCT GCCTCCAGTG GTAATGCAGC CTTTGGCCAA
GGTGCTGCCA ATACACAGCA ATCGGGTGGA TTGTTTGGGA ACAAACCAGC CGGAGCTACT
GGTGGTGGCT TGTTTGGTGG AAGCAATACT GTCAACGCTG CAGCTGGTGC TAGTGGCGGA
TTGTTTGGAG GTAGTTCTAC CAATCAAGGT GGAGGTCTTT TTGGTTCAAG CAACAATGCT
GGTGGATTAG GGACCAATAC ACAACAATCT GGCGGTTTAT TTGGTGCCAA ACCTGGTAAT
ACAGGAACAG GTGGAGGTTT GTTTGGTGGT GGATCGTCGG GAACAAACAC TCTTGGAAGT
TCGACTCTTG GAACCAACGT GTTGCAGAAT AATGCCCAGC AATCGCAACA GCCATTGGTC
AACATAAACT CTCAAAATCC ATATGGGAAC AACCCGATTG TTATGTTCCA GAGTATTACC
GGAAGTCAGC AAACTAATGC TGCTGGTCCA TCTATCACAC CAGTAAAGAC TGTCAACAAG
AAACCCGTAA CATTGGGCAA TCCTCACAGA GTTGCTCCAA TATTCAGGGT GAGTGCATTG
CCAAAGAAGA AGTCTACATC TCTGAACGAG AAGGCTCTTG TAACGAAGAA GCCCGACGGT
GTATTCACGG CCAGTACAGA TGCGGCTATT ATATCATCGG ATATTTTTGC ACCAAAGGAC
AATTTCAAGA AGCTTGTCTT GGATAAGTCT CAGGAAAGCA ATACCAAGTT GCTTCCAAGT
ACCGAGTCCC AGAATGGTCC TACGAAACAA GTTACTTTCC AATTGGAGAA ATCCAGCACT
TCCGCTGCTA CTGAAGCTAT TGAAAATGGC CAAGACAAAA CCAAGTCCAA GCATAAAAAG
AAAGAAGTTG AATCAGAAAA GATCGTTCCT CCAATCACTT CGTCTACACC AGAACATACT
CTTACAGATG AAGTTGACGA TAATGGCTAC TGGACATCGC CCCCATTGTC TCAATTGAAG
AGCAAATCGT TGTCAGAGTT ACGTTCTATC AAGGGGTTCA AGATTGGACG CAAGCACTAC
GGACAAGTCG AATTCTTGGA TCCAGTCGAC TTGTCTAGCA TCGTCAACTT GGATGATATT
GCCGGTAATG TGATTATCTT TGGATCCAAG TCGTGTCTCG CTTACCCAGA CGAAAACAGA
CCCAAGAAGG GAGAAGGGTT GAATTTGCCA GCGCGAATCA CTTTGGAAGG ATGCTATCCT
TTGAACAAGG CTGATAAGAT GCCAATTCTT GATCCTAAGA GCGAGGTCGT AAAATTGCAT
ATTGAGAATT TGAAGAAGTT GCCATACATG AACTTCGAGT CATACGACGC AGCCACCGGC
AACTGGACAT TCACAGTAGA GTCGATGGAT GCTTGA
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| Protein sequence | LFGSSNTAGS PFGGSGATST FGTGTGTNST SFGASNAAAG GIFGGANKSG FGASTGAFGS
GGTSPFGATS GTGFGGVGGT VDSNTNNGTA VKPFAAVSEK DNTGTLNVFQ NICAMPEYKN
FSFEELRLKD YEQNRRYGSQ NAAGAAGSTT GGFSFGASTN APSSTSAFGS GGQTGFGAQP
NTGSAFGSSG AFGAGQPSSS PFAAQSNTTS TFGQQQQSSP FGGAAAGGSG FGTSNAASVF
GSSNTAFGAN KPATGFGATG SSFGNAGTGG GLFGSNNANS NTNANASPFG GTGNTAGGFG
QTSNSPFGQS NTGNAFGQSN TGSSPFGTQN NAGGGLFGGA RNNLSNSNAF GASNTNAGFG
ASSTGGGLFG GAQNTASTFG ANKPATGGLF GGAGQSNTQA GGLFGQNNQQ QNTSGGLFGQ
NNQQQQQQAS GGLFGAKPAG NTGGLFGSSQ TSNTATGGGL FGGNTNQSGA GGLFGAKTNT
SGGLFGASQP ASSGNAAFGQ GAANTQQSGG LFGNKPAGAT GGGLFGGSNT VNAAAGASGG
LFGGSSTNQG GGLFGSSNNA GGLGTNTQQS GGLFGAKPGN TGTGGGLFGG GSSGTNTLGS
STLGTNVLQN NAQQSQQPLV NINSQNPYGN NPIVMFQSIT GSQQTNAAGP SITPVKTVNK
KPVTLGNPHR VAPIFRVSAL PKKKSTSSNE KALVTKKPDG VFTASTDAAI ISSDIFAPKD
NFKKLVLDKS QESNTKLLPS TESQNGPTKQ VTFQLEKSST SAATEAIENG QDKTKSKHKK
KEVESEKIVP PITSSTPEHT LTDEVDDNGY WTSPPLSQLK SKSLSELRSI KGFKIGRKHY
GQVEFLDPVD LSSIVNLDDI AGNVIIFGSK SCLAYPDENR PKKGEGLNLP ARITLEGCYP
LNKADKMPIL DPKSEVVKLH IENLKKLPYM NFESYDAATG NWTFTVESMD A
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