Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_42490 |
Symbol | |
ID | 4836726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 47102 |
End bp | 48952 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388041 |
Product | predicted protein |
Protein accession | XP_001382771 |
Protein GI | 150864077 |
COG category | [B] Chromatin structure and dynamics [K] Transcription |
COG ID | [COG5076] Transcription factor involved in chromatin remodeling, contains bromodomain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.814262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCCTC CTAAGAGAAA AGCTTCTGGA GCATTTTCTG GCGCAACAGG CACTCCCAAG AAACACAAAC CAAGCGAATC TCCCACACCC GAAGAACTCA AACAGTTCTA CGAATCAACA TTAAAGCTTG TTTTTGATCT CAGAGACGAG TCAACTGATG AGCAGGTGGC TTTCCCGTTT GTGAAAGTAC CCTCCAAGAA GCTCTACCCA GATTACTATG AGATTATCAG TCATCCCATC GCATTACATG ATATTCTGAA AAAGATCAAC AAAGGAAAAT ACTCGGAATA CGCGACAATT GATGAGTATG TAGATGACTT TCAACTTTTG CTTGACAATG CTGCCAAATA CAATGATCCA GAATCTTGGA TCGTCACTGG AGCTCAGCAG ATCTACGATT TTGTAGTTAA GCAGAAGACT GTCTTCTTGG ACCGTATAGC GAGCGAACAT GCCTCAGCGG CCGCAAAGTC TTCCGAAACA CATCACAAGC TCAAGTTGAA GCTCAAGGAG CCAGCTGAAG ATAAGTCTGG TGTGACTTTT GCCAGGTTGC CCCAGATTTG TTCCGAACTT CTTCAGGATG TCATAACCCA TGACTTTCCT GATGAAGGCA TTATCTCCAG CCCCTTTATG GAAGAGGTAG ACTTGGATGA GTATCCTGAC TATATTAACT ATGTAGAAAA GCCAATGGCG TTCAACACGG TGGTGACACA ACTCGGCAGA AAGAAGATGT TCTCTCCTAA GAATTCCGTT TTGGAGAACA TACAGAAGTT CAGTGACATG ACCACCCTCA TCTTCGCAAA TGCACAAGCA TACAATGATC CCAGTTCTGA GATTTACCAG GATTCTGTAA AGCTCCAGAA CCTATTTAAT GAGAAGATCG ACGTATTGAA GTCTCAGATC GAAGATCTGA AGTCAGCCAA GTTGAAGTTG AAGTTATCCA AACCAAAACT CAAGCTCAGT CTTGGTGCAC CAGAAGAACC ACACGTACCA AAGAAGCGCG GTAGAAAGAA GAAGGTGGTA GTCCAAGAAG AGATCAAGCA AGAAGAAGAA CAAGATGTAG ACACAAGAGA TTCGCTTGTA GATGACAACG ATGATTCAAG AGATCTGATT GATGACCAAG AATTCAAGTC AGGAGTTTTG GCGGCTGAGA AGTTCACTCC AAATACATTG GGAAAGTCTG CTCCAACGAT TCCAGTCACG GATACTGCTA TCCAGGAAAC ATCCATAAGC TCTTCCATAA CTGTTGTCAG CCAGACCAGT CAATATGCGT ATCAAAAGGT CCAACAGACT AATATTCCGC TTCAAAGACA TCAAGACTTG AAGAAGGCAT TGTTCCCAAC TCACCATGTA GTACCATTAA CTTCGCTATT TGACTACCGT GTCCCTTCCA ACGGTTTTAG TACCCAAGCA TATACCATCA CTTTGCCTCC TGAAGTTCTG CCACTCGTGA CCTTCAAGGC TACGTTGCAC AGCATACTCT ATGAAATCAA GAGTGGAGAC ATGATAGATG GACATACATA CTTGAACCTG GGCTCAGAAG AAGACTTCCA ATGCAAGCTC TTTGTTAATG ATGAAGAAGT CTCCACAGCT GGTGACTGTT TTGAGGAAAA GGGGCCGGAT GACACTGATC TTCTTGCCGT TCTGTTCGAT TTGAAATTAA ATTACGGATT GAATTGCTTG AGTTTCGAAT GCAAGGTTGC CCCTTCTTTG AGCAAAAGAA TGAGAAGCTC ATTAAAGCAG GATGAAGGAG AAGAGACCTC CGGCAGACAC ACCAGACACC AATTGCAGCA GCTCAAAATG ACATGGGATG TAGAAACAAT CAATTTCTAT GTCATTTGCA ATTCTTCCTG A
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Protein sequence | MVPPKRKASG AFSGATGTPK KHKPSESPTP EELKQFYEST LKLVFDLRDE STDEQVAFPF VKVPSKKLYP DYYEIISHPI ALHDISKKIN KGKYSEYATI DEYVDDFQLL LDNAAKYNDP ESWIVTGAQQ IYDFVVKQKT VFLDRIASEH ASAAAKSSET HHKLKLKLKE PAEDKSGVTF ARLPQICSEL LQDVITHDFP DEGIISSPFM EEVDLDEYPD YINYVEKPMA FNTVVTQLGR KKMFSPKNSV LENIQKFSDM TTLIFANAQA YNDPSSEIYQ DSVKLQNLFN EKIDVLKSQI EDSKSAKLKL KLSKPKLKLS LGAPEEPHVP KKRGRKKKVV VQEEIKQEEE QDVDTRDSLV DDNDDSRDSI DDQEFKSGVL AAEKFTPNTL GKSAPTIPVT DTAIQETSIS SSITVVSQTS QYAYQKVQQT NIPLQRHQDL KKALFPTHHV VPLTSLFDYR VPSNGFSTQA YTITLPPEVS PLVTFKATLH SILYEIKSGD MIDGHTYLNS GSEEDFQCKL FVNDEEVSTA GDCFEEKGPD DTDLLAVSFD LKLNYGLNCL SFECKVAPSL SKRMRSSLKQ DEGEETSGRH TRHQLQQLKM TWDVETINFY VICNSS
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