Gene PICST_42277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_42277 
Symbol 
ID4836887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2502342 
End bp2502680 
Gene Length339 bp 
Protein Length112 aa 
Translation table12 
GC content44% 
IMG OID640388202 
Producthypothetical protein 
Protein accessionXP_001382710 
Protein GI150864032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.047688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTG AGTACAACGT TGTTGTTTTT GACAAGCCAA ATGTCGACAG ATTAAAAGTT 
AGATCTCAAC ATCTTGCTGG CATTGTCCTG GCAGTCAATT CTGGTGTTCT TACCTTGGGA
GGAGCCATCT ACCACGACGA GGCTAAGACT AAATTCGCTG GTAGTACGTT GCAAGTTGCT
GCCAACTCTA AACAAGAAGT AATTGATTTC TTGAAGACTG ATGTCTACTA CAAAGAAGGA
ATCTGGGATC TTGACAATGC TATTATCCAC CCAGTTGGCT TAGCTGTACG TTTGCCAAAG
AAGTTGGACG GTGTTCCCGA CTCGTTCTAC AACGTCTAG
 
Protein sequence
MSTEYNVVVF DKPNVDRLKV RSQHLAGIVS AVNSGVLTLG GAIYHDEAKT KFAGSTLQVA 
ANSKQEVIDF LKTDVYYKEG IWDLDNAIIH PVGLAVRLPK KLDGVPDSFY NV