Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_42242 |
Symbol | |
ID | 4837160 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 785883 |
End bp | 786533 |
Gene Length | 651 bp |
Protein Length | 181 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388475 |
Product | predicted protein |
Protein accession | XP_001382388 |
Protein GI | 150863791 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.129287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.322783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTGGA CTGACATTAT ACTCCAACAG CTCAATATCA GGGACGAAGT TCAGGACAAG GAGTCGCCTT ATTTCCATGC TTTCACAGTA CTAAGCAACC AGCTTCAGTC TCAGAAGTTA CTCACTGAAC AATTCACAAC TAACCAAACG AGTTCGTCAC CGTCTCCTTC GCCGTCTTTG ATCACAGATT CATCCTCCAA GATCGACAGA AGTAATCATA CAAGTCAGTC GGAGATTGGA GCGTCGGAGT TACTCCATTG GTCTGTGATA TCCCGTGAGA ATCATAGACT CAAACAGGAA AACACCGATC TAATAGCTTC GCTCAACCAA TCGGCCATTA ACCTTGAAAA AGCGGAAATG GCCCTTTCCT CAGAGATAAA GACAAAGAAA TCACTAGAAA AAATGCTAGC AAGACTGAAT ACCAAGATCG ACAATTTGGG CCATGAGCTC AAGGAAAAGG ATAAAGCCAT AGAAATCATC AACGACGAAA TTCTTCTCCA CCAAATCCAG ACCAATGTGC TAAACGATAA GGTGGCAGAG TTATCGCGAC AAAACGAAGT CCTTGTCCAA AGACTAATGA CACGAGCTCA GGTAGAAGCC GAAAAGCTCA ACGATGCTAA TGAAAAAGTT CTGAAAAAGC CGCCTAATTG A
|
Protein sequence | MSWTDIILQQ LNIRDEVQDK ESPYFHAFTV LSNQLHNHTS QSEIGASELL HWSVISRENH RLKQENTDLI ASLNQSAINL EKAEMALSSE IKTKKSLEKM LARSNTKIDN LGHELKEKDK AIEIINDEIL LHQIQTNVLN DKVAELSRQN EVLVQRLMTR AQVEAEKLND ANEKVSKKPP N
|
| |