Gene PICST_42119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_42119 
SymbolHNT1 
ID4837603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2495227 
End bp2495697 
Gene Length471 bp 
Protein Length156 aa 
Translation table12 
GC content47% 
IMG OID640388918 
Productprotein kinase C inhibitor-I, histidine triad nucleotide-binding protein-like protein 
Protein accessionXP_001383234 
Protein GI126133418 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.149088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTG TTGCATCCAA TGCTTCCTGT ATCTTCTGCA AGATCATCAA GGGCGAGATA 
CCTTCGTTCA AGTTGATCGA AACGGCCAAG TCATACTCCT TTTTGGATAT CCAGCCTACT
GCTGATGCCC ATGTATTGGT GATTCCCAAG TACCACGGAG CCAAGTTGCA CAACATCCCA
GACGACTACT TAGCAGACAT TTTACCGGTA GTCAAGAAGT TGACCAAGGT GTTGCACTTG
GACGAAAACA ACACTCCAGA CGGTGAAGGT TACAATGTGT TGCAGAATAA CGGTAGAATT
GCACACCAGA TGGTAGACCA TGTCCATTTC CACTTGATTC CCAAGAGAGA TGCTGCAACT
GGTTTGGAGG TCGGGTGGCC AATGCAAGAA ACTGACTTTG ACAAGTTGGG CGCCTTGCAT
ACCAAGCTTC AGGACGAATT GAAGAAGCTC GACGAAAGTG AAAAGTTGTA G
 
Protein sequence
MASVASNASC IFCKIIKGEI PSFKLIETAK SYSFLDIQPT ADAHVLVIPK YHGAKLHNIP 
DDYLADILPV VKKLTKVLHL DENNTPDGEG YNVLQNNGRI AHQMVDHVHF HLIPKRDAAT
GLEVGWPMQE TDFDKLGALH TKLQDELKKL DESEKL