| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_42095 |
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| Symbol | ATG7 |
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| ID | 4836974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1395895 |
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| End bp | 1397853 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388289 |
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| Product | Autophagy-related protein 7 (Autophagy-related E1-like activating enzyme ATG7) |
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| Protein accession | XP_001383035 |
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| Protein GI | 150864282 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
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| TIGRFAM ID | [TIGR01381] E1-like protein-activating enzyme Gsa7p/Apg7p |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0582833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATA GCGATAAGAC GGCCGCAAGA GTCGCACCAA AATATGTGCC CATTCTGTCG
TTTGTAGAAC TGTCTTTCTT TACCAAATTA TCTGAACTCA AGCTTAACGA GTTCAAGCTT
GATTCGTCCA AAAGAGACAT CCACGGGTTT ATCACCTCCC CCAGACGGCT CAATAAGTTC
AATGACCAGC CCACTTTGAA TTTGGACTTG CAAAGCTTTG ATATTGCAGA AAAGGAAGCT
AACAACCTTC ATATAAGCGG AGAGCTCTAC AATGTGAACA CCATAGAAGA GTTCAAAAAC
ATCAACAAGC TGGACTTGCT CAACGACTGG GGCAAAGAGG TGTACACACG CCTTATACAG
ACAGAGTCGT TGGATTACAA GGCGTTCAAT TGGTTTTTCA TCTTAACTTT TTCTGACTTG
AAGAAGTACA AGTTCTATTA CTGGGTTGCC TTCCCCACAT TGAATGCTCC GTGGTTTGTG
ACTTCGACCA GAGATGATTC CTTGGTAGAA AAACATACTA AAAACATCAC TAGACTCCTA
GAGAATGATG GAGATTCCGA AAATCTTGCG TTCTCCCAAT TGTACCAAGT AGTAGGAGAG
TCTTACTTAG ATTTGAATTC TATTCGTAGT AGTCGTAACG GTGTGTTTGT GTTTCTCGAT
GGCTGTTTGA ACAAAGAAAC CAAACCCTCG GTCCAGTTGA AGAACTACCT CTACTTCTTG
GCCTACAAAG GCTTTGAAGA CGTCGATGTG ATCGTATATA GAAACGACGG GTCCAGTTTT
CAGGTTCATT ACGAGCTAGA CACTGATTCC TTCAACAAGA ACGTCCAGCC AAAGATAACC
GGCTGGGAGA GAACGAGTCA GGGTAAGCTT GGGCCAAAAT TGGCAGATCT TGGCTCGTTG
ATCAACCCGC ACCAATTAGC TGATCAGGCT GTGGATCTCA ATTTGAAGTT GATGAAATGG
CGTATTGCTC CGGAACTCAA CCTAGACATC GTCAAGGAAC AGCGGGTACT TCTTCTTGGC
GCAGGTACTT TGGGAAGTTA TGTGGCAAGG GCGTTAATGG GCTGGGGCGT GAGAAAGATT
ACGTTTGTCG ATAATGGGCG TATCTCATAT TCTAACCCTG TACGGCAACC TTTGTTCAGT
TTTAAGGATT GTTTCAGCGA TAATGGACAA GGTGAAATGA AGGCTGCACG AGCTGCTGAA
GCCCTTAAGG AGATATTTCC TGGTGTAAGT TCTGAGGGTA TTAGTTTGGA AGTACCCATG
ATTGGGCATC CGGTGAGCGA CGAAGCCAAA CTGAAGAGTA ATTTCGGAAC GCTTTCACAA
TTGTTTGACG ACCATGACAT CATCTACTTA TTGATGGACT CGCGTGAATC GCGCTGGCTT
CCCACGGTTC TTGGCTATGC TAAAAACAAG ATTGTCATCA ACGCTGCATT GGGGTTTGAT
AGTTATTTGG TGATGAGACA CGGGAATTTA AGCCAACCAG AAGAGTCCAG GCTTGGTTGT
TATTATTGTA ATGATGTTGT TGCACCCAAC GACAGTCTTA CCGACAGAAC GTTGGACCAG
ATGTGTACCG TAACCAGACC CGGAGTTGCC CTTATGGCTT CTGCTTTGGC TGTAGAGTTG
CTTGTTTCCA TCCTACAACA TCCTGATGGA AGCAAAGCTG CTCAGGATGA GAGCACCAAG
TTTGGTGGTG TTCCTCACCA AATTAGAGGC TTCTTGCACA ACTTCCAGCA GACAAAGCTT
TATGCTCCTA ACTACAAGCA CTGTTCAGCT TGTTCACACA CGGTGATCAG TAAGTTCGAA
GAAGAGGGCT GGGAGTTTGT CAAGAAGTGT TTGAACGACT CGGGATACTT GGAGGAAATT
TGTGGGTTGA AACAGGTCCA GGAAGAGGCC GAGAAGGCTA CGGAGGATTT GATGAAGGAT
ATGGACTTAG ACGATGAAGA TTCTGAGTGG TTGGACTAG
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| Protein sequence | MSDSDKTAAR VAPKYVPISS FVESSFFTKL SELKLNEFKL DSSKRDIHGF ITSPRRLNKF
NDQPTLNLDL QSFDIAEKEA NNLHISGELY NVNTIEEFKN INKSDLLNDW GKEVYTRLIQ
TESLDYKAFN WFFILTFSDL KKYKFYYWVA FPTLNAPWFV TSTRDDSLVE KHTKNITRLL
ENDGDSENLA FSQLYQVVGE SYLDLNSIRS SRNGVFVFLD GCLNKETKPS VQLKNYLYFL
AYKGFEDVDV IVYRNDGSSF QVHYELDTDS FNKNVQPKIT GWERTSQGKL GPKLADLGSL
INPHQLADQA VDLNLKLMKW RIAPELNLDI VKEQRVLLLG AGTLGSYVAR ALMGWGVRKI
TFVDNGRISY SNPVRQPLFS FKDCFSDNGQ GEMKAARAAE ALKEIFPGVS SEGISLEVPM
IGHPVSDEAK SKSNFGTLSQ LFDDHDIIYL LMDSRESRWL PTVLGYAKNK IVINAALGFD
SYLVMRHGNL SQPEESRLGC YYCNDVVAPN DSLTDRTLDQ MCTVTRPGVA LMASALAVEL
LVSILQHPDG SKAAQDESTK FGGVPHQIRG FLHNFQQTKL YAPNYKHCSA CSHTVISKFE
EEGWEFVKKC LNDSGYLEEI CGLKQVQEEA EKATEDLMKD MDLDDEDSEW LD
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