Gene PICST_41822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_41822 
Symbol 
ID4836965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1607364 
End bp1607822 
Gene Length459 bp 
Protein Length152 aa 
Translation table12 
GC content47% 
IMG OID640388280 
Productpredicted protein 
Protein accessionXP_001382532 
Protein GI150863898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.592037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCGA CACAATCGTT CAAATCCAAT CCTTTGAACA AGATCATCAG TCTCTCCATA 
CTCCTATCTA TGGGGTTTCT TCTTGTGATT TTGGCAGGAA TCTATGGCAA TTGGTTTCCC
ATCATCATTG GCATCATTTT TGGGATCGCC CATTTGCCTG TAGCCATAAC GAGGGCTGTG
GCCTCATCGT CGGACTACGA CTTCAACTTT GATCCCAGCT CATCTTCTGC TGGAAATGTA
GTCAAGGAGT TCGGTGAGTT TTTGTCGGCC TTTTTGGTAA TGACCGGGTT GTACTTGCCG
GTTTTGTTGG AGCACTCGCA TATTCTCACC AAGACTGCTA TGGTTCTTAC GATTGTAGGA
GGCTGCTTGA TCTACGGGAC GGTCTACACC TTTAGTCTGT TCTTTGATGA GCCTGAGGAG
GAAGACGTAG TGGCCGACCT CGGTGGAGGG GTCATCTGA
 
Protein sequence
MNSTQSFKSN PLNKIISLSI LLSMGFLLVI LAGIYGNWFP IIIGIIFGIA HLPVAITRAV 
ASSSDYDFNF DPSSSSAGNV VKEFGEFLSA FLVMTGLYLP VLLEHSHILT KTAMVLTIVG
GCLIYGTVYT FSSFFDEPEE EDVVADLGGG VI