| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_41744 |
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| Symbol | |
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| ID | 4836819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 122187 |
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| End bp | 122846 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640388134 |
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| Product | predicted protein |
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| Protein accession | XP_001382252 |
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| Protein GI | 150863694 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5143] Synaptobrevin/VAMP-like protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00440664 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.343781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTTC TGCTTTATTT CATGAAGAAA TCGTTAACCA ATGCCGATGG AAGTAGTGAT
ATGATCACGG TAGTGACGAT AGCGCATGCA AATGTAAACA AAACGCTCGT GTTGACAATA
TTGAAAAAGA TTACGGATAA GTACATCGAA TTCAGGCTCG ATTCTGATCC TACTAAAAGT
GACCAGCCAC AACAATTGAA GCATAAAATG GGAGAATTCA AGCCTTACAT GAATCAAATC
ATAAAGTTTG AAGAGATAAA CTACGACACA AACCAGCGAA TGTATAGCTA TGGAAATCGA
AATGATGGCA CTGACAATGA AACTTCTGCA TTGCTTGGAA GCTCGAGTTC GGACCAAATC
AACCCCAACC AGCTTCTTTT GGCAAACGAA GAAGTAGAAG AAGTCAGGCA ATTCATGTTG
GAGAACATCA ATAAACTCCT CAGTCGAGGA GATAAAATCA ACCTGTTGGT TGATCAAACA
GATAGGTTAA CAACTTCATC TCTGGTTTTC CAGAAACGGT CACAGCAGAT CCGTAGAAAA
ATGTGGCTAA GTAAATCAAA ATTCATGCTC ACTATTGTAG GAGTGGCTAT CTTCATCATT
TACATCCTCT TGGGGTCCCT GTGTGGATTC CCATTGTTTG ACCATTGCAT CCATCACTGA
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| Protein sequence | MRLSLYFMKK SLTNADGSSD MITVVTIAHA NVNKTLVLTI LKKITDKYIE FRLDSDPTKS
DQPQQLKHKM GEFKPYMNQI IKFEEINYDT NQRMYSYGNR NDGTDNETSA LLGSSSSDQI
NPNQLLLANE EVEEVRQFML ENINKLLSRG DKINSLVDQT DRLTTSSSVF QKRSQQIRRK
MWLSKSKFML TIVGVAIFII YILLGSSCGF PLFDHCIHH
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