| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_41725 |
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| Symbol | |
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| ID | 4837545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 91371 |
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| End bp | 93086 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388860 |
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| Product | predicted protein |
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| Protein accession | XP_001382779 |
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| Protein GI | 126132508 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00907] amino acid permease (GABA permease) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.817066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00692909 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAAAA TAGACTCCGA AAAGAGCACT GAGATACATA ACGTGCCCAG CGTTGGCTAC
GGAGAAATAC AGAACTATGT CTCCAATCGT ACCGCCCAAG GTATGCCAGC CTTGGATGCT
CTTGCCCAGG CTGATGGCAA GAATGCTGAG AAGTTGATGG AAGAAGCTCA GGCCAACTTG
GAATTAGTTC AGGAGACCGG TTATGCTCCA GAATTGAGAC GTAACTTTGG TGTGATCTCA
TTGTTAGGTG TGGGGTTTGG GTTAACCAAC TCTTGGTTCG GTATCTCGGC CTCTTTGGTC
ACAGGTATCA GTTCTGGTGG TCCCATGATG ATCATCTACG GTATTCTCAT TGTTGCCTGT
ATTTCCATGT GTGTAGCCAT CAGTTTGAGT GAGTTGATCA GTGCCATGCC TAATGCTGGT
GGCCAATACT ACTGGACAAT GAAGTTGGCT CCCAAGAAAT ACGCTCCTTT CTGGGCTTAT
ATGTGTGGTG CTTTTGCATG GGCTGGTTCC GTCTTCACAA GTGCTTCCGT TACTCTTTCC
ATTGCTTCCT CGGCTGTCGG GATGTACATG TTGTACCATC CAGACAAGAC CATCCAAACA
TGGCATGTGT TTGTAACTTA TGAAATCGCC AACATCTTAT TAGTATTCTT CAACCTCTGG
GAAAAACCTC TACCAGCCAT CTCAAAGAGT TCGTTGTATA TCTCTCTTTT GTCGTTCTTG
ATCATCACTA TTGTGGTGTT GGCCAAATCT GGAGGAGAAT TCCAATCGGC CAACTTCGTG
TTTGTGGAAT TTACTAACGG TACTGGTTGG AGTTCCAGTG GTATTGCTTT CATTGTTGGT
TTGATCAACC CCAACTGGTC CTTCAGTTGT TTGGATGCTG CCACCCATCT TGCTGAAGAA
TTACTTGAAC CAAGAAAGCA AATTCCAATT GCAATTATCG GCACTGTTAT TATTGGATTC
ATCACCTCGT TCTCCTACTC CATTGCCATG TTCTTCTGCA TCAAGGATTT GGACGCCATC
TACAACTCCA ACACTGGTGT GCCAATCATG GATATCTTCT ACCAGGTATT GAACAATAAG
GCTGGTGCTG TCATCTTGGA ATTCCTAATT TTCTTGACTG CCATCGGTTG TAACATTGCC
TCTCACACTT GGCAGGCTAG ATTATGTTGG TCTTTTGCTA GAGACAATGG TTTGCCAGGA
TCCAGATATT GGTCCAAAGT CAACCCAAGA ACTGGTGTTC CAGTGAATGC CCATCTTATG
TCTTGTGTGT GGTGTGCTAT CATTGGTTGT ATCTACATGG GCTCTACTAC TGCCTACAAT
GCCATGGTCA TTGGGTGTAT TATCTTTTTA TTGATGTCAT ACGCTGTGCC AGTTGTTTTC
TTGTTAATGA AGGGAAGAGA CAACATTAAG CATGGTCCAT TCTGGTTAGG TAAAATTGGA
CTTTTCGCCA ACATTGTTCT TCTCGTCTGG ACTGTATTCA CTACTATTTT CTACAGTTTC
CCACCTGTCA TGCCAGTCAC CGCAGGTAAC ATGAACTACG TCTCTGTCGT AGTTGGTGTC
TTTGGAGCAT ACTGTATTAT CTATTGGTTT GCTAGAGGCA AAAAGAAGTT CATCACTGCA
GAAGACAGAG AAGCAAAGAT TGACGAGTTG ACACACCAAT TGTCGCAACA AATATCACAC
ATAGAAGTCG TTCTCTCCCA CAAGAACGAC GTGTAA
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| Protein sequence | MSKIDSEKST EIHNVPSVGY GEIQNYVSNR TAQGMPALDA LAQADGKNAE KLMEEAQANL
ELVQETGYAP ELRRNFGVIS LLGVGFGLTN SWFGISASLV TGISSGGPMM IIYGILIVAC
ISMCVAISLS ELISAMPNAG GQYYWTMKLA PKKYAPFWAY MCGAFAWAGS VFTSASVTLS
IASSAVGMYM LYHPDKTIQT WHVFVTYEIA NILLVFFNLW EKPLPAISKS SLYISLLSFL
IITIVVLAKS GGEFQSANFV FVEFTNGTGW SSSGIAFIVG LINPNWSFSC LDAATHLAEE
LLEPRKQIPI AIIGTVIIGF ITSFSYSIAM FFCIKDLDAI YNSNTGVPIM DIFYQVLNNK
AGAVILEFLI FLTAIGCNIA SHTWQARLCW SFARDNGLPG SRYWSKVNPR TGVPVNAHLM
SCVWCAIIGC IYMGSTTAYN AMVIGCIIFL LMSYAVPVVF LLMKGRDNIK HGPFWLGKIG
LFANIVLLVW TVFTTIFYSF PPVMPVTAGN MNYVSVVVGV FGAYCIIYWF ARGKKKFITA
EDREAKIDEL THQLSQQISH IEVVLSHKND V
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