| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_41690 |
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| Symbol | |
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| ID | 4837658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 113078 |
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| End bp | 116860 |
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| Gene Length | 3783 bp |
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| Protein Length | 1260 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640388973 |
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| Product | predicted protein |
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| Protein accession | XP_001382785 |
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| Protein GI | 150864089 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.616815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.809166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA AAGAAAAGGC TCGATTGCGC CGCAATACGT CCCAGGAACT GCGACCTCTC
ATACCGTCTC ATATACTTGA TGAGGCTACC CAGAGACTTT TTGTATTGTC ACTATTTGTT
TTAATTCAGA GTTGGAAGCT TTATGATGTC ACGTTGCTAA AATCAAATGC CTTGGCAGAA
TATGCTTTGA CTCCATTGAA CAATTTCTCG TTTGTCTTGA AGTATGCTAT CATAGATGGC
CTCTTCTTGT GGCTCTTGCC AGTATTGAGT ATCCAGTACT TGATCTTTTC TCCCTTGAAG
ACATTGTTGT TTGCGCTCTT GCTCAATGGA GTGACATTTT TCCTTGTAAG CAGCGTACCG
GGCCCATTAT TGGGAAGTAT ATTCATGCCG TTATGGAAAT TGGTGTTCCA GAACAGGGAA
TTGACCATTG TAGGGGACTC AATTGACTTG AACTCTGTAG TGGATATGGA TTCCCATTTC
AAGGGTAAAC TCACCATTCA TTATTTGCCT GATTCTTCTG CCCGAATGAA TCCTTTCCAT
TTTGATCAGC TCTGTTTGGA CCCTAATCAG ATTCTAGAGA TGCCAGTAGA GTTCAATACA
ACCACCGATA TTGGCTACTT ACAAATTGAA CATACTGCGG TCAACAATGA AATCAAGAAT
GTGGACTTCA AAGGTCACTC CCTACGTAGG TTATTGAGAG GAGACTACCG TTATTTATCC
AAGTATCCTG AGTTCAAACG AGGCGACGAT CGTGTCTTCT ACATCCTGTT CCCAATCAGC
GAGCCTGGCT CGTATAAGAT CAAAAGCGTG ACAGATTCAA AGGGATTAAG CATCAGAACC
TACAAGTCCG AGTTCTTGAT TTCCAGCTGT CCTAGAGCCC AATTTTCATA TCCACCTAAT
TTCGACGATT CTAAGAACTA CAGATGTATA AACAGTAAAC AGGATGAGGA CAGTTTGCAT
ATGCCTTTAG TTGAGTCCTT CGGTGTAACT CCTATGTCAG TATTGATCTC TTCATCTTTG
AATGGAAAAT TCTACAAAGA ATTCAATGTT ACAATAGGCG ACAAGACAAC GTCATCGTCC
AGCAAAGATA TATCGTGGCT AAAAGCATAT CAGATCAGCA GAAATACATT GGAACAAGAA
ATCTCAAAGG ATAGTGACTT TTTTTCCGTA GCAGGAGAAG GAATATTGAA GTTTCAATTG
ATCGAAATAA GGGATTACTT AGGAAACACC AAAAGGTACA ACCCCTTATC AGATGAAAAG
GACATCAGAT TTGAATATGA ATTAAAGAGA GGCCCAAAAT TGCAAATTGT TGACCTGGAT
TCAGTTACAG AGTTGCTTCT TGATGACAAA AAGACAATCA AGATATTGGG CACCGAATCG
TTGAAAGAAA CTGATTTTCC ATTATCTGTA ACTATCGTTC ATTTACTTAA TACAGCAACA
AATATAACCA AAGAGTTTAC CAAAAGAAGT GATCTTGATC ACGGTATTCA GATTTCTCAA
CCGGGTATCT ACCAATTGTT GGAAGCCAAG ACTAGGTATT GCGACTGTGA ACTTGTAGGA
CAAGCTGTGA ATATTACCGT TGCTCAGCCT CCAACAGTTG ATATTAATGC TACACCTATT
TCGGATAAGT GTCTCGGAAC TGTTGGTTAC ACTTTTGATC TTGATTTGTC TGGAAAACCA
CCTTTTCAAG TTCAATATCA TATTTATACG AGACAGTCCA ATGGGATCTT GAGACCTGTT
CATAGCTCGA ATGGAAAATC TTCCAGATTA ATCAGAACAT TGGAGAAGAG GCATTCTTTC
ACTTTCCGTC CTCCAGCAGA AGGAAACTAC GTGGTCGTTT TCAACAATCT CAAAGATCTC
AACTACAACC AGAGACCTGT CGTATTGGAT GAACTGAGAT TTACGTATCT GACATACTTT
AAGAAACCGT CAAGAGTATC ATTTTTTGCG GGAAATGCAC AACAGAAAAC AATAAACACG
TGTTTTGGAG AAAGAGCAAA GATTCCACTA TACTTTGAAG GCAATGGTCC ATTCACATTT
AATTATGATT TTGTCGATGT TCGTACAGGT CAAAAATTGG TCAATACAGT CACAATAGAG
GATATACTGT CCTATGAAAT CGAAGTACCA GAATCAATTA AAGGAGGAAA GTACGAAATA
AAGTTATCCA ATATTACAGA CAAGGCTGGT TGTAATGCCA TTTTGGATGA AAGAGAAAGA
ATCATAATCA ATAGCAGAAC CGACATACCA GAGGTTCAAA TCAATAATGA AGTCAGTCAT
TTTCAGATTG TGGAAGGTGA CTCAGTTGAG ATTCCAATTA AAATCAAATC TTCTGTTGGA
AGAACCAACA ACGACAAGAT TGAATACGAT TTTATTGATC TTTTCGATAA GACCAAGCGT
ACTAGAAGAT CCTTACAAGG CAATAGACCA CTTCGAGTTA ATGCAGCCGG AGAGTATTCA
CTTGCAAACT TTGAAAATGG AGGGTGTAGC GGAAAGGTTA TAGGCCAAGA CAAGAAAATC
ACTGTGTCTT ACTATGATAG ACCAAGACTT GTAGTTTCCA GTCCTAAGGA AATGAAGCAA
CATAAAGACG ATTCTGCCCT TCATTTACAA CCAATCTGTC AAGACTGTAA GAACCAAGTG
CAAATCACCC TTGAAGGAAC CGTGCCATTT GTCGTTGACT ATGAAATTAG ATATCCAAAT
GGAAGAGTAG AAACTAGATC CATGAATGTG GCTTCTCGTC AATTGATGAT CGACTTACCA
ACTGCTCACA GTGGAAGGTA CGAATATGCG TTCAAGGGTA TTTATGACAA CTTGTATACA
AAAGAAAAAG TTCGGAATTT CCATCAGAAA TTGCCGAGAG TCTTCTACGA TGTCAACCCT
TTGCCATCAT TGGAATTTGA CCAAGAACTT CAAATTTCTC AACTTTGCGA GAATAGAGTC
AGACCTGGGA AGCCTCTCGT GAAAATACCT ATTCAACTCA GCGGTTCGTT CCCATTTAAG
ATCAATGCCA CATTGACACA TGCGGCTACT GGTTTAAAGG AAACATTAAT TTTTTCAAAG
GTTACTGAAA ACTCCATTGT TGTCAATGGT AATAAGTCTA TCAAGGTTGG TGAACATATC
TTAACCATTA ATGAAGTAAC TGATGGTAAC GGGTGTTCGA AAAAAGATTT CCTTCCTTCA
AACAATTACA TTATAGCAAT AACCGAAGTT CCAAACATCT TCAATAGCTA CCCGACCCAG
CAACATTATT GTGTTGGAGA CCACATTGCA TTCAAGTTGA CAGGTGTGTC ACCTTATACC
GTGTACTACA ATTTTAACGA GAAGTTGCAG AAGGCTGAAG TGCCATTTCT TTTCCTGAGA
TTGGCTTCCA AGCCAGGATT CTTGACTATC GATGCTGTTC AGGATTCTTC AGCTAGTAGT
TGTTTGGTTA ACTTTACAGC TCTTGGTTCA CCAAGAGAGG ATTTGAAACT ACAAGTTCAC
GATTTGCCTT CTGTCGAAGT CAATAAAGGT GATTATATTG TTGAGGATTT ACATGAAGGA
GAACAGACAG AATTGATTTT CAGATTCTTT GGGGTTCCAC CATTCACTGT GACATACGTT
AGGACTACAG AATTAAACGA CAAGAAGCTG AAGAAGAAGG CTGAAGCCAG AAAGATAATA
GAGACTCATA CCATTGACAA TATCATGGAA TATGAGTATA CTGTTTTGGC CAGTCTTGAA
GGTACTTACG AGGCCATTGT GATACTGGAC GCATACTGTA CTGCCAGAAG AAGTCTAGAA
TAA
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| Protein sequence | MAEKEKARLR RNTSQESRPL IPSHILDEAT QRLFVLSLFV LIQSWKLYDV TLLKSNALAE
YALTPLNNFS FVLKYAIIDG LFLWLLPVLS IQYLIFSPLK TLLFALLLNG VTFFLVSSVP
GPLLGSIFMP LWKLVFQNRE LTIVGDSIDL NSVVDMDSHF KGKLTIHYLP DSSARMNPFH
FDQLCLDPNQ ILEMPVEFNT TTDIGYLQIE HTAVNNEIKN VDFKGHSLRR LLRGDYRYLS
KYPEFKRGDD RVFYISFPIS EPGSYKIKSV TDSKGLSIRT YKSEFLISSC PRAQFSYPPN
FDDSKNYRCI NSKQDEDSLH MPLVESFGVT PMSVLISSSL NGKFYKEFNV TIGDKTTSSS
SKDISWLKAY QISRNTLEQE ISKDSDFFSV AGEGILKFQL IEIRDYLGNT KRYNPLSDEK
DIRFEYELKR GPKLQIVDSD SVTELLLDDK KTIKILGTES LKETDFPLSV TIVHLLNTAT
NITKEFTKRS DLDHGIQISQ PGIYQLLEAK TRYCDCELVG QAVNITVAQP PTVDINATPI
SDKCLGTVGY TFDLDLSGKP PFQVQYHIYT RQSNGILRPV HSSNGKSSRL IRTLEKRHSF
TFRPPAEGNY VVVFNNLKDL NYNQRPVVLD ESRFTYSTYF KKPSRVSFFA GNAQQKTINT
CFGERAKIPL YFEGNGPFTF NYDFVDVRTG QKLVNTVTIE DISSYEIEVP ESIKGGKYEI
KLSNITDKAG CNAILDERER IIINSRTDIP EVQINNEVSH FQIVEGDSVE IPIKIKSSVG
RTNNDKIEYD FIDLFDKTKR TRRSLQGNRP LRVNAAGEYS LANFENGGCS GKVIGQDKKI
TVSYYDRPRL VVSSPKEMKQ HKDDSALHLQ PICQDCKNQV QITLEGTVPF VVDYEIRYPN
GRVETRSMNV ASRQLMIDLP TAHSGRYEYA FKGIYDNLYT KEKVRNFHQK LPRVFYDVNP
LPSLEFDQEL QISQLCENRV RPGKPLVKIP IQLSGSFPFK INATLTHAAT GLKETLIFSK
VTENSIVVNG NKSIKVGEHI LTINEVTDGN GCSKKDFLPS NNYIIAITEV PNIFNSYPTQ
QHYCVGDHIA FKLTGVSPYT VYYNFNEKLQ KAEVPFLFSR LASKPGFLTI DAVQDSSASS
CLVNFTALGS PREDLKLQVH DLPSVEVNKG DYIVEDLHEG EQTELIFRFF GVPPFTVTYV
RTTELNDKKS KKKAEARKII ETHTIDNIME YEYTVLASLE GTYEAIVISD AYCTARRSLE
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