| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_41434 |
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| Symbol | |
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| ID | 4836705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 970317 |
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| End bp | 970826 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388020 |
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| Product | predicted protein |
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| Protein accession | XP_001382960 |
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| Protein GI | 150864225 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5122] Transport protein particle (TRAPP) complex subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.492391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATAT ATTCATTCTA CATCTTCGAT AGACACTGTA ATTGCATCTA CAACAGGGAG
TTTACACATT TGGATCATGC CAACGCCTCA GGGGTAGGTC AGGTGAATAA GAATAACGAC
TCCAATGCTT CCAAGTTGCT ATTTGGTATA CTCTATTCGC TCAAGACGAT CTCAGCCAAA
CTCATAGACC TGGAATCAGA GGCTGAAACC GCAGTGGCCA ATGCCCTCAA GTCTTTCACT
ATCGGACCAT ATAGAGCACA TTACTTGGAA TCGCTTACAA GATTGAAATT TGTACTTGTC
AGCGACGACA ACATTGACAA TTTGCAGGCC ATCTTGTGGG AGTTGTATTC AGTCTATTAC
ATACGGAACG TAGTACATAA TGGGTTATCG CCCATCGAGT TCAAGCAGTC GGATGACTTC
AAAGAGAACG AAACCGTGGG GAAAATCAGC AATTCAGGGT TTATCACGGA AACCGACCAA
TTTCTCCAGT CTCTTCGTTT CTTCAATTGA
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| Protein sequence | MTIYSFYIFD RHCNCIYNRE FTHLDHANAS GVGQVNKNND SNASKLLFGI LYSLKTISAK
LIDSESEAET AVANALKSFT IGPYRAHYLE SLTRLKFVLV SDDNIDNLQA ILWELYSVYY
IRNVVHNGLS PIEFKQSDDF KENETVGKIS NSGFITETDQ FLQSLRFFN
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