Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_41366 |
Symbol | |
ID | 4836678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 851569 |
End bp | 852771 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640387993 |
Product | predicted protein |
Protein accession | XP_001382936 |
Protein GI | 150864204 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.122227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.125571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGT ACCACGACCT TCCGGATATC GACACCAACG CCCCGGATGT GTTTGAGACA TCGGACGTAG AAAGTGATCT CGAGTTGTCT CACCATCATA GTGAATCTAG TCCAACTCTA GAAGAAGATG ATTCGGAGAT CAAACACCAG CAATTGAATG CTGAAACTGC CAGAACTCGC TTTTCTCATA GTCTGTTGGT GCCCCAAGAT GGTGCAGACT TTCTGGGTAG CGTTTCTTAT CCCAAGCTTG GGAAATCGGG GTATTTGATC GAGACAACGG TCGAAACAAG ACAACAGAAG TTGGCAAGGA TAGCGCGAGA GCTAGAGGAA TTGAAGCAAG AAGGTGAAAA TGATGTGGAG AAAATATTTT CAGAAAATGT AGACGGTTTA CAAACTCAGC TCCAAGAAGT TCTTGAAAAG ACTGTTTCAG GAAGTAACTC CAAAATTCGC CAACTTGATG TATATAGTCA GAGGATTAAC CACCTTTTCG AAGCGATATC TAGTAATATT ATTAAAGGTG AAGTTTATGA AAAATCGGCG CCCCAGAATG AGGCTAGCTT TCAGAAATCG AGCACCTCGA CAAGTCCCAG TGAGATCCTT TCGCTTGAGA ATAGAATCAA CGAGTTGGAA AAGTTAATAG GTGTAGATAT GGTCCAGAGT TTGAGTTCCA AGCCCACTGG AACTACGGCA TCTCTTCAGA GCTATGTCAA TGACTTGAGT CGAAAGATCA ACATAGTGCA TAATCCTGAA TATCACATCG CCGCCGTGAA ACTGGAAGTA GAACTGCTCA TAGCGAAGAT GGATGAGTTG GAGACGAAGA GAAGGATTGC AGAAATACGG GAAACTACGC TTGGAAAACC TCAACAAAGT ATCAGTGAGT CTACACCCTT ACAGAAAAAG ATAGATGACT TATACAAAAA CTTACCAGAA TTTGAGAGAG CGAACAAGTT GGTGCCATCT GTAATTTCAA GACTTAAGTC TCTCAGCGTA GTACATTCAG ACTTGGCTGG TTGTACTCAG ACAGTAGGGG AGTTGGATAG TATTCTAGGT GATTTAAGGG ACGATATGAA ACGATGGGAC GACAGCTTAA ACGACGTTAA TGCAAAGATA GACAACTATG AGACCATTTT TGGGGAAAAT AGAAAGGTGG TGACGGCACA GATTGAGGAG TTGGAGAGCA AGATAGATAA AGTATTCAAA TAG
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Protein sequence | MEKYHDLPDI DTNAPDVFET SDVESDLELS HHHSESSPTL EEDDSEIKHQ QLNAETARTR FSHSSLVPQD GADFSGSVSY PKLGKSGYLI ETTVETRQQK LARIARELEE LKQEGENDVE KIFSENVDGL QTQLQEVLEK TVSGSNSKIR QLDVYSQRIN HLFEAISSNI IKGEVYEKSA PQNEASFQKS STSTSPSEIL SLENRINELE KLIGVDMVQS LSSKPTGTTA SLQSYVNDLS RKINIVHNPE YHIAAVKSEV ESLIAKMDEL ETKRRIAEIR ETTLGKPQQS ISESTPLQKK IDDLYKNLPE FERANKLVPS VISRLKSLSV VHSDLAGCTQ TVGELDSILG DLRDDMKRWD DSLNDVNAKI DNYETIFGEN RKVVTAQIEE LESKIDKVFK
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