Gene PICST_41353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_41353 
Symbol 
ID4837235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2569702 
End bp2570394 
Gene Length693 bp 
Protein Length230 aa 
Translation table12 
GC content43% 
IMG OID640388550 
Productpredicted protein 
Protein accessionXP_001382726 
Protein GI150864045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGGG GAGCTTTTGT TCTTGGTTCC ACAGGGATGT GTGGTTTGCA AATGCTCAAA 
GCTGTAGAAA AGTCGGCTTC CTTTGATAAG GTTGTAACCA TTGGGCGCAG ACCTCCCTCT
TTGGAAAGTC CGAAATTAAA AGCAATTGTC GAGAAAGATT CAGAGAAATG GGGAGAGATA
GTTGAAAAGG AGGCCAAGGG CTTCAAAGTA TTAATGTCTG GCCTTTCAAC TACCAGAGGT
GCTGCAGGCT CTGACGAAGG CTTCTACAAC ATCGACTATA CACTTAATTA TGCTGCAGCC
AAGGCAGCCA AGAATGCTGG TGTTGAGACC TACGTTTTGA TATCTGGCTC ATTTGCAGAC
GCTAACTCAA GGTTTCTTTA TATAAAAACT AAAGGGAAGC TTGAGGATGA TGTCAGAGCA
CTCAAGTTTA AAAGAACCAT AATTTTTAGA CCAGGCTTAA TCCTTGGAGA CAGAGAGAAA
AAGAAGAGTG CTGGGGAAGA ATTTATTGTC AGCATCTTGA AGTATACGTA TGGAAACTTC
CTTTCCAACA TTACTAATCC AATCTACGCA AAACATATTG GAGAAATTGC TACAACATTG
GCACTGGAGC CTATCCCAGA AGATCAGACC GAACCTACAG TTAGAATCAT AGGAGCCAGA
GAACTCAGTG CCTTAGGTAA GGCATTACCA TAG
 
Protein sequence
MAGGAFVLGS TGMCGLQMLK AVEKSASFDK VVTIGRRPPS LESPKLKAIV EKDSEKWGEI 
VEKEAKGFKV LMSGLSTTRG AAGSDEGFYN IDYTLNYAAA KAAKNAGVET YVLISGSFAD
ANSRFLYIKT KGKLEDDVRA LKFKRTIIFR PGLILGDREK KKSAGEEFIV SILKYTYGNF
LSNITNPIYA KHIGEIATTL ASEPIPEDQT EPTVRIIGAR ELSALGKALP