Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_41353 |
Symbol | |
ID | 4837235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2569702 |
End bp | 2570394 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388550 |
Product | predicted protein |
Protein accession | XP_001382726 |
Protein GI | 150864045 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGGG GAGCTTTTGT TCTTGGTTCC ACAGGGATGT GTGGTTTGCA AATGCTCAAA GCTGTAGAAA AGTCGGCTTC CTTTGATAAG GTTGTAACCA TTGGGCGCAG ACCTCCCTCT TTGGAAAGTC CGAAATTAAA AGCAATTGTC GAGAAAGATT CAGAGAAATG GGGAGAGATA GTTGAAAAGG AGGCCAAGGG CTTCAAAGTA TTAATGTCTG GCCTTTCAAC TACCAGAGGT GCTGCAGGCT CTGACGAAGG CTTCTACAAC ATCGACTATA CACTTAATTA TGCTGCAGCC AAGGCAGCCA AGAATGCTGG TGTTGAGACC TACGTTTTGA TATCTGGCTC ATTTGCAGAC GCTAACTCAA GGTTTCTTTA TATAAAAACT AAAGGGAAGC TTGAGGATGA TGTCAGAGCA CTCAAGTTTA AAAGAACCAT AATTTTTAGA CCAGGCTTAA TCCTTGGAGA CAGAGAGAAA AAGAAGAGTG CTGGGGAAGA ATTTATTGTC AGCATCTTGA AGTATACGTA TGGAAACTTC CTTTCCAACA TTACTAATCC AATCTACGCA AAACATATTG GAGAAATTGC TACAACATTG GCACTGGAGC CTATCCCAGA AGATCAGACC GAACCTACAG TTAGAATCAT AGGAGCCAGA GAACTCAGTG CCTTAGGTAA GGCATTACCA TAG
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Protein sequence | MAGGAFVLGS TGMCGLQMLK AVEKSASFDK VVTIGRRPPS LESPKLKAIV EKDSEKWGEI VEKEAKGFKV LMSGLSTTRG AAGSDEGFYN IDYTLNYAAA KAAKNAGVET YVLISGSFAD ANSRFLYIKT KGKLEDDVRA LKFKRTIIFR PGLILGDREK KKSAGEEFIV SILKYTYGNF LSNITNPIYA KHIGEIATTL ASEPIPEDQT EPTVRIIGAR ELSALGKALP
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