Gene PICST_41315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_41315 
SymbolMNT44 
ID4836810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1041365 
End bp1043014 
Gene Length1650 bp 
Protein Length550 aa 
Translation table12 
GC content40% 
IMG OID640388125 
Productalpha-1,3- mannosyltransferase 
Protein accessionXP_001382975 
Protein GI150864236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.046308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GACGAATCGA AGCTTGAATT ATCAGAAGAG GAATTAAGCC AATTGGAGCC AAAATACCAA 
GAGATCCTCA AGTTGATTTC TGAAGAAGAA CAAATACTCC ACGACTATAT GGCCCACTTG
AAAATATTCA ACAGATGTTT CTTGAAAGAT GCTGGTGTAC TGAAACAAAA TGATGCCTTT
ATTTCTAGCC AAAAGTCAAA ATTGAAAGGA TTGCAGTTCA TCAACCAAAA GCCAGGGTCT
CGCATCACCA AGAAGGAGAA GGCCATATTC TCTACTACAA GACACTTGGA AAACAAACTC
TATCCCTGGT TGTCTCAGAA ATCTCCCATC TATGAAAACG GTGGCAAGAA AACAGCATTG
ATCTCTTCTA TGTATCCATT CGCATCGACA CCCTTCTTAA AACAATTCAG AGATAAATTA
TCGGGAAAAG GTATAGTTCT CACTATTGCA GATCACCATT TAGAGAGCAC CATCCGATTA
ATTCACTTAT TAAGAGCATT GCTCAACGAT CTCCCCATAC AAATCATATA TACCCCAGAG
TCGTTGTCTG AAGAATCGAA GCATCAAATT CTCCAGGCTT CAGTTTCTGC ATTCAACACT
TTCCCAGTCC AGGATGTTAC TTTCGTAAAT GTGGAGCCTG CTATAGCTGA AAACTACAGA
GGCAAGTTCG GGGGATTTGG CAACAAGATC CTTGCGGTGT TGTTCAATAC CTTTGAAGAG
ATGATGCTTA TTGATGCTGA TACCGTAATA ATGATACCAC CATCAGAGTT CTTTGAATTG
AGGAAATACA AGAGATCAGG AACTTTATTC TACAAAGATC GTTCCACTAT TGAATTCCGT
CCAGAATCTG ATCTCGTCTT TTTCAAAAAA CTCATGAACA CCCAGGTGGA CGAAGTTATG
TTTGGATTGG CACAGCCAAG CAATTCGACC ATGCAGTTGC CTTTTTTTGC CTATCGTTTG
AACCATTTGA TGGAAAGTGG TTTGGTACTT GTAGACAGAA GAAGGTACTT TGAACAACCT
TTGATCATGG CTCAGTTGAA CTTCTACAAC ACCGTTCAAT CACGAGTTTA TGGAGATAAG
GAATTGTTTT GGCTTGCGCT TGTGATTTTG GGTCAGAATG AGTTCCAATT CAACGAGCTT
TTTGCTGGTG CTATTGGCGA AGTTACTCCT AAGGCCGAGA GATTCAAAGA TATCGGCAAA
GAAGTCAAGT TAAGATCGAA GGAAATATGT TCTAACCATC CTGCCCATTT CAACGATGAA
GACTACCACA CTTTACTTTG GTTCAACTCT GGTTTTGAAT TCTGCAACCA AGTTTTTCAA
GTCGACTTTG AATATGAGTC TGGGGATAAG AAGAGATACA GCAAATTCAA AACAACAAAG
GAATACGAAA CTTTCATGCG GGATAAGTTG AAAATAAAGG CCGCCATCAT TCCTCCAGCA
CCAACTGTCC ACGCAGACAA CGACCTTGGT GAACCTAACC GCGGGTGGTT TAACATGAGA
CAGTATTGTT TTGGTTATAC TTGGTGTGCT TACAGTTCTG TGGGTGAAGG TGATACTGAA
GAATCACAGG GACTATACAT TGAGTTCAAT CTGAACGAAA TAAAACATTT TGAATGGCTT
GGAAATACAT GGATGAGTAG ATTTGACTAC
 
Protein sequence
DESKLELSEE ELSQLEPKYQ EILKLISEEE QILHDYMAHL KIFNRCFLKD AGVSKQNDAF 
ISSQKSKLKG LQFINQKPGS RITKKEKAIF STTRHLENKL YPWLSQKSPI YENGGKKTAL
ISSMYPFAST PFLKQFRDKL SGKGIVLTIA DHHLESTIRL IHLLRALLND LPIQIIYTPE
SLSEESKHQI LQASVSAFNT FPVQDVTFVN VEPAIAENYR GKFGGFGNKI LAVLFNTFEE
MMLIDADTVI MIPPSEFFEL RKYKRSGTLF YKDRSTIEFR PESDLVFFKK LMNTQVDEVM
FGLAQPSNST MQLPFFAYRL NHLMESGLVL VDRRRYFEQP LIMAQLNFYN TVQSRVYGDK
ELFWLALVIL GQNEFQFNEL FAGAIGEVTP KAERFKDIGK EVKLRSKEIC SNHPAHFNDE
DYHTLLWFNS GFEFCNQVFQ VDFEYESGDK KRYSKFKTTK EYETFMRDKL KIKAAIIPPA
PTVHADNDLG EPNRGWFNMR QYCFGYTWCA YSSVGEGDTE ESQGLYIEFN SNEIKHFEWL
GNTWMSRFDY