Gene PICST_41123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_41123 
SymbolMNT42 
ID4837144 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1307185 
End bp1309371 
Gene Length2187 bp 
Protein Length707 aa 
Translation table12 
GC content39% 
IMG OID640388459 
Productmannosyltransferases-like protein 
Protein accessionXP_001382471 
Protein GI150863852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.159663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0172418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTATA ATGCGTTGCG GCGATCGAGA ATTCTTATAT TAGCACTTCT AATCTTGATA 
GGATATCTCA CATACCATCT GAAAAATCGA CTGCCTCCGC CCATACAGAT CTCAGAGTTT
GATATAGTCG GTGCCCGAAA CTCGTTTATC AATCCTATCT ACGAAAAATG GAACTATAAG
AAAAACGCAA AATCTATAAA CAAATATGAA TATCTCAAAG ACGTGCCGTT GGAATCTGTT
TGCACAGCTT ATTTCGATGA ACTTTCGAAA TTGTACCCCG GAAATCCTGG ACCCACTATT
GTTGATTTGG AGGAGATACA AGGCACCAAA TACGACTCGA CAGTATTCAA GAAACAGAAG
TGGGTTTCGG CTAGAAGAAG AAACAAAATT ATCAGCTTTC GAGGCTCGTC GGGAAGAATG
TCTCAGGAAG ATATTATCCA GATTGAGCTC GATTATGCAA AGACATGTCA AACTGTTTCA
CAGCAAGAAA GATCTGTATT CAACCAATTT GCTCATGCCA GAGTATTTGG CAAATGTATT
TTAGGAAATC AGAACAGGAG CTCAGAACAG ATCCAGAAAC TCGATGTGTT GGGCTCTAAG
TTCGAAAAGA AACTCTACCC ATGGGTTTCT CAAGAAATAC CTACATTTGA GAGTTGGCTG
GGTGAGATGT TGAAAAAGGG CAAAATTCCT GTTCTTGATA ATGTAAAATT CGATGCTTAT
CAAGAAACTC AAGTGTTCCT CAAAGATTGG CAGAGCAAGA GTAATGGAAG GGGAATTGTA
ATACCTATTC TCCCAACTTC TTCAAGAAGT ATTCAAGTCG AGAATATTGC CAGATTAATA
AAAGTGTTGC GAGGTCTAAA GAACACCTTC CCAATTCAAA TAACTCATGT GGGGGACCTC
CTGGACCTGG AAAAGAAGAT AATTGCTACG GCTGCCAGAA CAGAAGTATC CCGTTTACCT
TCTTCTCATA AAGTTTATCT TGATGCTCTG GGAGAAAAAG ATCACAAGTT TGTGTCGACT
ACTGATTTTC CCAAACAGAA AGTGTGGTTC GTAGACTTAA CTCCAGTAAA GAATAAAATA
AAGCACCCTC TCGTTGCAAA GAGCTCCGCC TATAATAGTG CCCAATTTGT CCTTGCATTG
AGCACTATTT TTAATTCCTT TGAAGAATCA CTTGTGCTCT TATCATCTTC CATTCCATTA
GCAGAGCAAT TAGAAAAGAC TTTCTTTGAG AATAAATCCT ATAAGGAACA TGGAATTTTG
TTATTCAAGA GACCTTCATA CTACACAAGC AAGATCAGAA GATTCAAACC AGGATTTCAC
GAGCTCACCA ACCTCATTCG TCAATATATG ACTCCTTCTC AGAATGACAA AGATTTCTTT
GGTCTTAATT TGAGAAATCC CGAAGTTGAG TCTTCGAACA GAGTATACGA AGAAAGCTTC
CAGAATTTGT TGGATCCTTC AGTAATGGTG ATCAACAAGA CGAAAGTATT GAGTGGGTTG
TTGATGGGAG CGAATTTCCA ATTATATGAT CTCTTCAAGC TAAGATTTGC TCCTGTCGAG
GACGATTTGA ATCCTGAGTT CGTTTGGATA GGACAAGAGT TGGCAGGAAC CAATGTAAAG
GTCAATTTCA ATCATAATTA CGGAGTAATT GCTGGCATTC TAACTCCAGA AGAGAACAAG
AGTCCTGTTG CATCTTCTGC CATAGAATTA TGCTCCTCAT CATGGGCCCA ACTTTCGGAT
GTTGACGACT ACACACTCTT GTATGTTACT TCTCACCAAT TAGAGAATTG GATTTACGAG
GGTATGACAT TCAAAGAAAA CCTAAAAGGC AAGTATGCAA TGAAGAAAAC TGAATTGGTC
GATAATGTGT TCAAGCCTGG AGAAGAAAAT AACAAGGTAG AGGTAATTAA AGAAGATACT
ACAATGTTTC AGGAGAAGGT GGTAGCAAAC CCATTATTTA TCGACACCAT ATTGCGTCCA
CCCATAATTA AGAAGCCGAT ATACACCTCT GAATTTCAAG AACCTAACCA GGCGTGGTTG
AAACAGGATA AATTCGCAGG TTTCTCGGGC CATCAGTACT ACTGTGCCTA TGATGTAGTT
GGGCTGCCTG TGACAGGTGA AAGAGGATTG ACTATTAGTG TTAATGATAA GCTACAAGCT
TGGTATAAGT ATGTTCTTGA CGTATGG
 
Protein sequence
MVYNALRRSR ILILALLILI GYLTYHSKNR SPPPIQISEF DIVGARNSFI NPIYEKWNYK 
KNAKSINKYE YLKDVPLESV CTAYFDELSK LYPGNPGPTI VDLEEIQGTK YDSTVFKKQK
WVSARRRNKI ISFRGSSGRM SQEDIIQIEL DYAKTCQTVS QQERSVFNQF AHARVFGKCI
LGNQNRSSEQ IQKLDVLGSK FEKKLYPWVS QEIPTFESWS GEMLKKGKIP VLDNVKFDAY
QETQVFLKDW QSKSNGRGIV IPILPTSSRS IQVENIARLI KVLRGLKNTF PIQITHVGDL
SDSEKKIIAT AARTEVSRLP SSHKKVWFVD LTPVKNKIKH PLVAKSSAYN SAQFVLALST
IFNSFEESLV LLSSSIPLAE QLEKTFFENK SYKEHGILLF KRPSYYTSKI RRFKPGFHEL
TNLIRQYMTP SQNDKDFFGL NLRNPEVESS NRVYEESFQN LLDPSVMVIN KTKVLSGLLM
GANFQLYDLF KLRFAPVEDD LNPEFVWIGQ ELAGTNVKVN FNHNYGVIAG ILTPEENKSP
VASSAIELCS SSWAQLSDVD DYTLLYVTSH QLENWIYEGM TFKENLKGKY AMKKTELVDN
VFKPGEENNK VEVIKEDTTM FQEKVVANPL FIDTILRPPI IKKPIYTSEF QEPNQAWLKQ
DKFAGFSGHQ YYCAYDVVGS PVTGERGLTI SVNDKLQAWY KYVLDVW