| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_41008 |
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| Symbol | NPR1 |
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| ID | 4837001 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 741539 |
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| End bp | 744076 |
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| Gene Length | 2538 bp |
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| Protein Length | 826 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640388316 |
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| Product | nitrogen permease reactivator protein |
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| Protein accession | XP_001382909 |
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| Protein GI | 150864185 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.291766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAACAGCCCA TCTCGTCGCT CACCAAGCTC TTGCTGGAAC TGTCTTCTAC TACCACCCTG
CCCAGTTTGC TGAAATCAGC TTCAGAAGTC TCACTTGACC AGAAGCTGCT GCTGGGTACT
ATCACGCCGG GAATAAACGG AACACTCTCG GATCTCTCTG GCATTTCGAA ATCTCGTCCA
CCATCAAATA ATAATGATGG CTCCAACGCT TCGCCGTTGA CGATTTCCAT CAAGACCAAT
GCAACTAACG GCGTAACCAA CGGCTCTGTG GTAAACGGAG ATTCTTCAAC CCCAAAATCA
ACGTCAGTGG TTAATGGATT TGATCCTCTA CCAGGAGCAA CGTCTAATTT CACACCTATT
TCGCCCAAAA ATAACACCAG ACCTTATGCC AACTCAATCT CCAGTAACTA CGGCAATGCT
GTGTTCCAGA ACCGGGACTC TTCTGCCATC ATAAACAGCA GTGGTAGTGT TAACAGCAGA
CCTTCCAACA TTACGTCAAC CTCCAGCCCC AGAGTCATTC GTAACAACTC TGTTTCTCAC
TCATCGTTTC TTGCTTCCGG CGGATACGGT GGAGAGAGTT TACTGTCGTC AATTCCGTAC
TCTGCTCCTG GCGGAAGAGC GAATAGCACT ACCGCTGGAG TTCTGTCAAT GGGAAATACT
GGATCAATCC ACAGCAATTC TCTGAGTCTG ACGCTATCGA CGTTGGGGGA GCTGGTTTCG
TCTGGAGCTC ACATTCCGAA TTTGCCGAAC GGCCAGCCAA TTCAGTCGAT TCACATCCAG
TCTCCACAAG TTAGTCTGCT GGCGATTGAG CCTCGATTCG TTATCTCTAA ACAGAGGGTT
GCACAGGCTC AGGCTGCTCA GGCAGCTTCT TTGAGTTCTT CGCAAAGATC CGGCTCTCAG
TCTGGTCTTT CCTACTTTTT CTCTAACAAG ACCAAACCGG CCACGAAACG AGAATCAACG
TCTTCCACTG ATTTGGGCTC GTTCTACAAC AACTCGTACC ACGACCAAGT CATTGCCAGC
TCGCCATCCT CAATTTCTTC TCTGGAGTCA CAGGCTTCAT TCACCCCTCA AACCAGACAC
AATTCTATGG CCAACTTAAA GAGGTTCTTC AAGAAGTCCA ATACACCTCA AGCTACTTCT
CCAGCCGTTT CCAACTTGTC CAGCTCGTTA AGATCCGCCG GAGTTTCACC TGGAGTGTCT
ATTCCCTCTA CCTCCGGTAT CAGCACACCC GGTAGTGGAT ACCAGCCCGG ATCTTATGGG
CCCTCTATCT CGACGTCGTC TTCTAACGCT TCGTACTCGC AGTCTCCCGG TGGTACTGGA
TTCACTGTGG GTGGTGGTTC TATCAGCAGA TCGTCTTCTA TTCTTCAGAA CAAGATCTCC
TACCAAGAGA GAAGACAGTC TGTTCTGACG TTGATCAATT CTCAACAACA GCTTCCTTTC
TCTAAGAGGT ATGGAAAGTT TGGTGAGTCA CTTGGTGCCG GAGCTGGTGG AGCAGTCAAG
TTGGTCAACC GGTTATCAGA TAAGAAGGTG TTTGCTGTTA AAGAGTTCCG TGCCAAGTAT
CAGAATGAAT CAAAACGTGA CTATGCAAAG AAGATCACTG GTGAATATTG TATTGGTTCC
ACTTTGAAAC ATCCAAACAT CATCGAAACT GTAGAAATCT GTTATGAAAA TGAGCGTATC
TATCAAGTCA TGGAGTACTG TGACTTTGAC TTGTTTGCTA TCGTAATGTC TAACAAGATG
TCACGTGAAG AAATCAACTG TTGCTTCAAG CAGATCTTGT CCGGGATCCA CTATTTGCAT
TCGATGGGAT TGGCGCATCG AGATTTGAAA TTGGACAACT GTGTCATCGA CGTCAGAGGG
ATTGTTAAAA TCATCGATTT CGGTTCAGCT GTTGTTTTCT CATATCCATT TACCAAGACT
CTTATTGAGT CCCAAGGCAT TGTAGGTTCA GATCCATACT TGGCTCCCGA GGTGTGTGTA
TTCAACAAAT ATGATCCCAG ACCTGTAGAT GTGTGGTCTG CTGCCATCAT CTACTGCTGT
ATGATGTTGA AGAAGTTCCC ATGGAAAGTG CCCAAGTTGT CCGATAGTAG TTTCAAGTTG
TTTGCCTCAC GTGGAGAGAT GATTCCCATC AGCGAAATGT TGAAGAAAAC ACCTCAGGAC
ATCCAGGACA AGGAGAACTC TGCCGAAGGA CTCAATCTTG AAGACGTAGC CAAAGAAGTT
GGGAACATTG AGAAGAGCGA AGGCAAAGCT CATACCTCCA CTGAAACTGG AGCTGGTAGA
TTGCTTCTTG CTTTGCCTGA AGACTGCCGT CCCTTGATTG GCAGAATGGT GGAGTTGGCG
CCTGCATGTC GTATTTCTAT CGAGGAGTGT TTCAATGACG AGTGGTTGAA CTCAGTCAGC
ATGTGTACAG TGGAAGCAGC TGTCCTTGAA GATGGAAGTA GCTCTCATGA AGTCGTCAGT
TGCGAGGACC ACGAACACAC CAAAGTGGAC CAATCCAAGG CACACATAGC TGCGTTTGAA
AAGAACAAGA AGAAGTAG
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| Protein sequence | KQPISSLTKL LSESSSTTTS PSLSKSASEV SLDQKSSSGT ITPGINGTLS DLSGISKSRP
PSNNNDGSNA SPLTISIKTN ATNGVTNGSV VNGDSSTPKS TSVVNGFDPL PGATSNFTPI
SPKNNTRPYA NSISSNYGNA VPSNITSTSS PRVIRNNSVS HSSFLASGGY GGESLSSSIP
YSAPGGRANS TTAGVSSMGN TGSIHSNSSS STLSTLGESV SSGAHIPNLP NGQPIQSIHI
QSPQVSSSAI EPRFVISKQR VAQAQAAQAA SLSSSQRSGS QSGLSYFFSN KTKPATKRES
TSSTDLGSFY NNSYHDQVIA SSPSSISSSE SQASFTPQTR HNSMANLKRF FKKSNTPQAT
SPAVSNLSSS LRSAGVSPGV SIPSTSGIST PGSGYQPGSY GPSISTSSSN ASYSQSPGGT
GFTVGGGSIS RSSSILQNKI SYQERRQSVS TLINSQQQLP FSKRYGKFGE SLGAGAGGAV
KLVNRLSDKK VFAVKEFRAK YQNESKRDYA KKITGEYCIG STLKHPNIIE TVEICYENER
IYQVMEYCDF DLFAIVMSNK MSREEINCCF KQILSGIHYL HSMGLAHRDL KLDNCVIDVR
GIVKIIDFGS AVVFSYPFTK TLIESQGIVG SDPYLAPEVC VFNKYDPRPV DVWSAAIIYC
CMMLKKFPWK VPKLSDSSFK LFASRGEMIP ISEMLKKTPQ DIQDKENSAE GLNLEDVAKE
VGNIEKSEGK AHTSTETGAG RLLLALPEDC RPLIGRMVEL APACRISIEE CFNDEWLNSV
SMCTVEAAVL EDGSSSHEVV SCEDHEHTKV DQSKAHIAAF EKNKKK
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