| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40776 |
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| Symbol | |
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| ID | 4837097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 248952 |
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| End bp | 250181 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388412 |
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| Product | predicted protein |
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| Protein accession | XP_001382812 |
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| Protein GI | 150864110 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
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| TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.838986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCTA CCGCTAAAAC ACTCCAGGCA ATCAAATTTG ACAAGGAGAA TATTTCGCTC
CAAATCTTGG ACCAGCTTTT GCTTCCTTAC ACAACCCACT ATCTCGATAT CAAGACGATC
GAAGATGCTT TTCTGGCTAT CAGGCTCATG CAAGTGAGAG GAGCACCTGC AATTGCCATT
GTAGGAGCTT TTGCTGTTGT TGTGGACACC AATGCCTCCT TGAAAAATGG TGGAAACAAG
ACTGTGTCCA AGTTGTTTGA CTCAATTGAC TATTTGGAGA CTTCCAGACC CACAGCTGTC
AACCTAGCCA ATGCACTCAA TGATATCAAG AAGTTGGTTA GTGCAAAATT TGGCCAGAAT
GACCTTGTAG ATGAAGACGT ATATCAGATC ATCTACAAGT ATTCTGTAGC CTTGTACGAA
GACGATTTGG CCAACAACTT CAAGATAGGC GCCAACGGCT TGAACTACAT CGTAGAAACA
TTGAAGAAGG ATGGTTTCAA GGGCGCTTTC TCCATAGTTA CTATTTGTAA CACGGGCTCC
TTGGCTACTT CTGGTCATGG AACGGCGTTG GGGATTATTC GTTCCACTTA CGACAAATTG
AAGAAGTCAG AATCCAGTGA GGAATTCTGG CTCGACCACG TTTATCCGTG TGAGACACGT
CCATATAACC AGGGTGCCAA GTTAACTACA TACGAGTTGC ACTACGAGCA GATTCCATTC
ACATTGATCT GTGACAATAT GGTTTCGTCG TTGGTGAATA CTTTAAGTAG TAACAAAAAC
ATCCAGGACA ACGCTGCAGC TCCAGTCAAG TTCATTATTG TAGGTGCAGA CAGAGTCGTC
AAGAATGGAG ACACTGCCAA CAAGATCGGC ACGTTCCAGT TGTCCACTAT CGCCAACTTC
TTCAACTCCA ATAAGCTTTC TGGTTCTGCC AACAAAATCA AGTTCATTGT GGCAGCCCCA
AGAACTACCA TTGATCTCAA CACTGCTACA GGTGACGAAA TTGTGATTGA GGAAAGACCT
GCTAACGAAT TGACCACTCT TAAGGGTCCC GTGTTGAGGG AAGATGGTTC CATAGGTGAT
AAATACACTG TGGGAATCGC CACTCCAGGT ATTTCGGTTT GGAATCCAGC TTTCGATGTC
ACTCCACATG CTTTGATCGA CGCTATTGTC ACAGAGGAAG AAAAAGTATA CACTAAGAAT
AGCCATGGAG AGTTTGAATT GTCGAAGTAG
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| Protein sequence | MASTAKTLQA IKFDKENISL QILDQLLLPY TTHYLDIKTI EDAFSAIRLM QVRGAPAIAI
VGAFAVVVDT NASLKNGGNK TVSKLFDSID YLETSRPTAV NLANALNDIK KLVSAKFGQN
DLVDEDVYQI IYKYSVALYE DDLANNFKIG ANGLNYIVET LKKDGFKGAF SIVTICNTGS
LATSGHGTAL GIIRSTYDKL KKSESSEEFW LDHVYPCETR PYNQGAKLTT YELHYEQIPF
TLICDNMVSS LVNTLSSNKN IQDNAAAPVK FIIVGADRVV KNGDTANKIG TFQLSTIANF
FNSNKLSGSA NKIKFIVAAP RTTIDLNTAT GDEIVIEERP ANELTTLKGP VLREDGSIGD
KYTVGIATPG ISVWNPAFDV TPHALIDAIV TEEEKVYTKN SHGEFELSK
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