| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40725 |
|---|
| Symbol | |
|---|
| ID | 4836987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 1334987 |
|---|
| End bp | 1337863 |
|---|
| Gene Length | 2877 bp |
|---|
| Protein Length | 958 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640388302 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382479 |
|---|
| Protein GI | 150863858 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATTG AAGAATACGA ACTACTTGAT CAAGAGCCAA GAGACTTGGA GCTGCAACAG
TCGTCACCGC CAGAATCTGC CTCGACACCT AGCCCCTACA ACGAAGTCGA AGAAGAGCCA
GAGTTACGAG ATTCGCTACA ATCAGATTCG TCTCAACTAT TTGACGATAT AGACGTTTAC
ATGTCACGTA ATAGTGCTGA AATCGATGAT TTCAGCAATA GCCCTTTGTT TCAGTCCGTT
TTTCTGAAGT ACCAGGGAGC TAACGTGTGG ATGAAAAGAG TTTGTATGGG ATTATGCATT
TTTTCTATAT TATTATGGCT AGCCGGTCTT CTTGTGTATT CACAGATGTC CCTATCTTCA
GCCGTCAAGA GTATAACCTG GCAGACAGAC GTAGAAGTTA GTGGTAAGAA TATCACTTTG
AACAAATACA GCCCTAAATA CGCCAATTTG ACCATTGATC AGATGAGAAA GTCGAAGTAC
GCAGCATACA AAACGACCAT AAAATGGCTA GAACCACAAC AATACCCCAA AGATACGGCT
CCAGTACCTC GTGGATCGGG ATTCTACTTA GAAAGAGATT CTGACCGATA CAATATAAGG
CAGATGAACA CCGTTTTTAC TGCCCCTTTT ATAGAAAGAA CCCAATTTGC ATACAGAAAC
AATTTCTTCT ACATAACGGA TGTCATATTG AACCCACACA AGCCAATTGA CGATCCAGAC
AACTATCATA TAGTTGTTAC AGACAAACTC GAACAATGGA GGAGTCTGAG TTTCGCATTG
TACTGGATAT ACAATCCATT AACAGCACAG TATATACCGA TACAACCACC CCAGAATTTA
AAGAAACTCC AGAACGATAA CCAGTTGCAG GAAGAGATTT TGGACAAGTT GCACTTCGCT
GAATTTTCTC CAAAGGGTGA TTTCGTCGTT TTTGGCTTCA ATCACGATAT CTTCTTGCAA
GATGTAGTCT CGAACGAAAT TCAGAGAATC ACTAATACAG GTTCTACCAG CATTTTCAAC
GGGAAACCGG ATTGGGTGTA TGAAGAAGAA GTGGCTGCTG ATTACAAGTT AATTTGGTGG
TCACCAGACC AAGAGAACTT GGTGTTTGCT TCTTTAAATG ATACGCTTGT CCAAGAATTT
GAATTGGACT ACTATATCAA AGACAGCACT GAAGTAGGTA CTCAGTACAA AGAACTGCTG
GAAAATAAAT TCGAAGATGT CAACCAGTAT CCTATAAAGA CGTCAATTAA GTACCCCAAA
CCTGGAACTT CGAACCCTAT ATTGTCATTA TTTAATTACA GACTTTCTGA CAAGTCTATC
AAAGAAATCA CCAAGTTACA GGATGGCTTG GGAGAAGATT TCATCTTGTA TAAAGCTGCA
TGGGTAGACA GCAAGAACTT TCTCATGAAG CTCACAGACA GAACAAGTGC CATTCTCAAG
AAAAAGGTAT TCCAGCCAGC TATATCATCT GAAGTTATTG AAGTCAATTC TATGAATGTG
ACTCAGGAGT ATGGAGGATG GGTTGATAAA CTTTCGCAAA TTGCCATTGT AGAAACAGAT
GACGACAAGG AAAATCTGTA CATTGACAAA GTAGTGGTCA ATGGTTTCAC TCATATAGCA
CTCTTCGAAT CAGCCACATC CAAAGACTAT GCCAGATTAT TGACATCCTC CAATACGTGG
GAAGTTCCAC TTAGCTCTCC ATTAGTTCAC GACAAGCAGT TTAACGTTGT CTACTTCTTG
ACCACTATAA GAAGTTCCAT GGACGCCCAT CTATATGCTG TTGATCTTTC TACTGATGAC
AACAAGTTGA TACCTATCAC AAGCTCTGAA GTAGACGGGT TGTACCAAGT TGAGTTCGAC
CAGGCGGGCC AACATTTGAA CTTGTTCTAC AAAGGCCCAA AACAGCCATG GCAGAGACTA
GTGAATATGG CCGAAGTTCA TGAATTCATT TCTTCTGGAG ATTTCAAGGG AAATGGTGTA
GACGAACTCA TCTTGAAGAG TGAAGTCATC AATCATTTTG ACGTTACTGA AGGTAACTTA
AAGGATACCA ACATTCCTAC AAAAGTGTAC AAGACTATTC AAGTAGGCAA ATATGACGAC
GGAAGCCCAC TTCGGTTGAA TGTGATTGAA ATCTTTCCCC CTAACTTCAA CCCTCACAGG
GCAAAAAAGT ACCCTTTACT AGTGTATGCT TATGGAGGTC CTGGCTCTCA AACTGTAGAC
AAGTCGTTTG ACATAGATTT CCAGCACATT GCTAGTGCTT CGTTGGATGC CTTGGTGTTG
GTTATAGATC CTAGAGGTAC AGGTGGGCAA GGCTGGAAAT TCAGTAGCAC CGCTAAGAAT
AGACTAGGCT ATTGGGAACC CAGAGATATC ACCACTATAA CTTCAGAGTA TATAACCGTA
AACAAGAAGT TTATCGACCA GTCCAGAACT GCAATCTGGG GCTGGTCCTA CGGCGGCTTC
ACTTCCTTGA AGACATTAGA GTTTGACCGT GGAAAGACCT TTAAATATGG TATGGCAGTG
GCACCAGTTA CAAATTGGCT ATTCTATGAT TCGGTGTATA CTGAAAGGTA CATGAATCCA
CCAAAAGTAA ATGGAAACTA CGAGAAGTAC GGCCGAATCA GCGATTACAA GAATTTCAAG
TCGTTGAAGA GGTTCTTGCT AATGCATGGA ACATCTGATG ACAACGTCCA CCTTCAGAAT
CTGCTCTGGC TACTTGACAA GTTCAATCTT GGAGAAGTTG AGAACTACGA TGTCCATTTC
TTCCCTGACA GTGACCATGG AATCTATTAC CACAATGCCA ACTCGATAGT TTTTGACAAG
TTGCTTCACT GGTTGAGAGA TGCATTTATG GGCAAGTTCG ACGGGTTGTA TAGATAG
|
|---|
| Protein sequence | MPIEEYELLD QEPRDLESQQ SSPPESASTP SPYNEVEEEP ELRDSLQSDS SQLFDDIDVY
MSRNSAEIDD FSNSPLFQSV FSKYQGANVW MKRVCMGLCI FSILLWLAGL LVYSQMSLSS
AVKSITWQTD VEVSGKNITL NKYSPKYANL TIDQMRKSKY AAYKTTIKWL EPQQYPKDTA
PVPRGSGFYL ERDSDRYNIR QMNTVFTAPF IERTQFAYRN NFFYITDVIL NPHKPIDDPD
NYHIVVTDKL EQWRSSSFAL YWIYNPLTAQ YIPIQPPQNL KKLQNDNQLQ EEILDKLHFA
EFSPKGDFVV FGFNHDIFLQ DVVSNEIQRI TNTGSTSIFN GKPDWVYEEE VAADYKLIWW
SPDQENLVFA SLNDTLVQEF ELDYYIKDST EVGTQYKESS ENKFEDVNQY PIKTSIKYPK
PGTSNPILSL FNYRLSDKSI KEITKLQDGL GEDFILYKAA WVDSKNFLMK LTDRTSAILK
KKVFQPAISS EVIEVNSMNV TQEYGGWVDK LSQIAIVETD DDKENSYIDK VVVNGFTHIA
LFESATSKDY ARLLTSSNTW EVPLSSPLVH DKQFNVVYFL TTIRSSMDAH LYAVDLSTDD
NKLIPITSSE VDGLYQVEFD QAGQHLNLFY KGPKQPWQRL VNMAEVHEFI SSGDFKGNGV
DELILKSEVI NHFDVTEGNL KDTNIPTKVY KTIQVGKYDD GSPLRLNVIE IFPPNFNPHR
AKKYPLLVYA YGGPGSQTVD KSFDIDFQHI ASASLDALVL VIDPRGTGGQ GWKFSSTAKN
RLGYWEPRDI TTITSEYITV NKKFIDQSRT AIWGWSYGGF TSLKTLEFDR GKTFKYGMAV
APVTNWLFYD SVYTERYMNP PKVNGNYEKY GRISDYKNFK SLKRFLLMHG TSDDNVHLQN
SLWLLDKFNL GEVENYDVHF FPDSDHGIYY HNANSIVFDK LLHWLRDAFM GKFDGLYR
|
|---|
| |