| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40695 |
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| Symbol | PSD2 |
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| ID | 4836962 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 881023 |
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| End bp | 884346 |
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| Gene Length | 3324 bp |
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| Protein Length | 1064 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388277 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | XP_001382941 |
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| Protein GI | 150864209 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.350595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCGCAGGCTT CTCTAGAGAA AGCGACATTC TTTAACCTTA CTCAGGAGTT CCAGTTGTTT
GTAAAAATCA ATGCCAATCG TGCAGCCGAC CTAGTTCAGA ATGGCGCAGA GGCTACTAAG
TACTCCTCCA AGAGAAGTGT CAACCCCCTC TTGATGGTGG TGATGAACGA TGTCAAGAAA
CAGACCTCTC GTAAATTGAA CACCAGCCAA CCGTCATGGG ACGACGAGTT AGTGATTCCG
CTCAAGCCTA ACTCCTACTC TCAACTATTA GTCCTAACGG TCTGGGATAA GCACAAGCGT
TACAGAAATT ACTTGGGCGA GCTTCGTCTA TCGGTGAAGG ATATCTTCAA TCTTGGAGGT
GCAAACTTCA AAAGTAGGAG CGATCTCAAG TGGTACAAGT TATACTCGAA CAGCGAATAT
CACAGTTTTG TCACGGGATC ACTTTTGCTC TCGTTTGAGT TAATAGTAAA GCGAAAGAAA
GTATCTAGAA AACAGCGCAA GCAACTTAAA CAATCAGAGG ACGAAAGAGC TATGGAGTCG
GTTCCAGAAT CAGCCGACGA AAACCATTCT AGCAATGGGA GAGACCAGAG CATGAACGAC
TTGTATAACA AAGTAGACGA CTTAAACATA AGTGAGGAAT ACGTGGTTGC TGACTCAACC
GAGGCTGAAA AGTCTGTGAT CCTCAAGAAC TGGATCAAAT CCTTGATAGA CCCAGAATTT
GAAACCAGTA CTAAGCCGGA CGAACAGGGC TTTTACAGAG AAACCAATAA GGCCTCCAAC
ACCCTAGTTG ACGCTTCAGA TATGGAATCT CTTGTAGATG AACCCAATTC TGGTTCTCTG
CCTCTCAAAC TTCACAAACC TCATTTCAAT GCTAGATCTT CTTCTCCCGC TAACGACGAC
GCCAGTTCTA TTTCTGAGAT GTCAATGATG TCTTCGGATG GTGGAGTTGC AACAGAAAGC
GATTCTGCAC TTTTGTCTAC TGGAGACGAA GTGAAGACCA AAAATTCAAA GCGATCGAAG
TTGAGAAAGA TAGCTCTCAA AAGATCATCT TTATTTCAGG ATAAGTTTGC ATTATCTAAT
AGAGAAGTTC TTGGAGTCAT ATTCATAGAA ATCGTCTCTT GTTCAGATCT ACCACCACTA
AAAAGTTTTA CTAGAGCTTC TTTTGACATG GATCCCTTTG TTGTAGTCAC TTTTGGCAAA
AAAACATTCA GAACAAGCTG GAAGCGCCAC ACATTGAATC CAATCTTTAA TGAAAGAGTT
GCATTTGAAA TCCTACCGCA TGAAAGCAAG TTCAACATTC AGTTTTCTAT ATTGGATAAG
GACCATTTTT CTTTCCATGA CGATGTGGGG CATGTATCGA TTCCTATCCA GGATATCACG
CAGGTATCTA CGGCATTGCC CATGGTTGCT TCAAGTTCTC TTGGAACTGG CATTCCTAGA
AAGTCAGTCT CCTATATGTC TTTGAATTTA GTAGATGGAG GATTCACCAC TGGTGATAAC
GATTCTCCAC TGCATTCGAG TATCCGAATC TTAGATGATG ACAACTTGAT TCCATCAATT
CGTAAAAAGA AGTTCAGGAA GAAAGTGACG CTAGAACAAG GCGATACCTC TAGCTTCAAA
GTTATGAATC TAAAGTTAGA CTTGTACAAA GATAAGTTCA AGGAAAAGTA TAACCCCGAA
TTAAAGATCC GAGTCAGATT TGAAACCTAC GAGAATTTGA GAAGACGATT CTGGGCCATT
CTTTTGGAGC AGTACAATCT TAACGACAAG GAAAATGCCT ACGATTACTT TGAGTTGATA
GCCTTGTTAG ACACTCTTGG TTGTGGTAAT AGTGACGAGT TGGTAGCTAG CTTCTACGAA
AAGCTTGGAA GGCTGACCTG GGGAGGTGAT CTCTTGTCTC ACGGTGAGAT CATAGACTGC
TTAGAAGAAC ATGTAAATTC TGCAAAAAGT GAAGGAGAAT ATAAAATCTT TGAGATTGAT
AAGTGCCCTA TTTGTTTGAA CAAGAGACTT AATAAAAAGA TTGACCGAGA CATCATTACG
CACGTTGCTA TCTGTGCTTC AAAAGATTGG AGTATTGTCA ACAAATTACT AGTAGCTACG
TACACCACAC CACAATCTGC TTCTCGGAAG TGGTTCTCAA AAGTTTTGAT CAAGATGACA
TATGGCAAGT ATGTATTGGG TGGAAATAAT GCCAACATCT TGGTTCAGGA CAGAAACACC
GGCCTTATCA TGGAAGAGAA AATGGGAGTC TATGTGAGAT TGGGAATCCG TTTGCTATAC
AAGGGGTTGG ATAAGGCCAA GACTAAGAGG ATCAGGATTT TACTAAAAAA GTTGAGTGTC
AAACAGGGCA TCAAGTTCGA CAGTCCTCAA CTGAAAAACG ATATAGACTC CTTCATCAAG
TTCCACAAGT TGAACTTATC GGAATGTCTT GAGACTGATC CCTCCAAGTA TGCCTCATTC
AACGAATTTT TCTATAGAAG ATTGAAGCAA GGGGCAAGAC CCATAGATTG CCCTAATGAA
CTGCAAATCG TTGTTTCTCC AGCAGATTGT CGTTGTACAG CTTTTTCCGA TATCAACAGT
GCAACTGAGT TGTGGATCAA AGGGAAGAAT TTCACCATTG CTAAATTGTT CAACGGCAAC
TTCAACAATC TCGAGAATAC TGATATATAC TCAGCTTCAA AGTGCTCCAT TGGTATCTTT
AGACTTGCTC CTCAAGATTA TCACAGATTC CATTGTCCCG TAGACGGAAC TATTCAAAAC
ATCAAGAACA TTGACGGAGA GTATTACACA GTTAATCCCA TGGCTATTAG ATCCGAGTTG
GATGTGTTTG GAGAAAATGT AAGAGCCATC ATTCCCATCA AGACTGACCA TTTTGGAACG
GTGATAATGG TAGCTGTAGG TGCCATGATG GTTGGGTCGA TTGTGCTTAC TGTTGGAGAA
GGCGATGCGG TTAAACGAGG TGACGAAATT GGATATTTCA AATTCGGAGG TTCTACCATT
ATTCTTCTTT TCGAGAAGCG ATTCTTCAAG TTTGATTCGG ATCTCGTAAA CAACTCCAAG
TCATGTGTGG AGACTCTTAT TCGTGTTGGT CAGAGTATTG GCCATTCTCC AGATGTCAAG
GAACATAAGC CTGCACGTAT AGATTTTGCT AAGCAGACAA AGGACTTCAA GTTGAACTTG
ATCAGAGTTC TAACCGGTGG AGATTTGAAC AATGCCAGCG AATTGAGCAA CTGGGAGAGT
TCCAACATCA AGATAACGAC CGAGGATATG GATGAGCTTG TGCAACAGCA GAATGTTCTT
GATGAAGAGG AAGAGGAAGA GGAT
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| Protein sequence | SQASLEKATF FNLTQEFQLF VKINANRAAD LVQNGAEATK YSSKRSVNPL LMVVMNDVKK
QTSRKLNTSQ PSWDDELVIP LKPNSYSQLL VLTVWDKHKR YRNYLGELRL SVKDIFNLGG
ANFKSRSDLK WYKLYSNSEY HSFVTGSLLL SFELIVKRKK VSRKQRKQLK QSEDERAMES
SVILKNWIKS LIDPEFETST KPDEQGFYRE TNKASNTLVD ASDMESLVDE PNSGSSPLKL
HKPHFNARSS SPANDDASSI SEMSMMSSDG GVATESDSAL LSTGDEVKTK NSKRSKLRKI
ALKRSSLFQD KFALSNREVL GVIFIEIVSC SDLPPLKSFT RASFDMDPFV VVTFGKKTFR
TSWKRHTLNP IFNERVAFEI LPHESKFNIQ FSILDKDHFS FHDDVGHVSI PIQDITQVST
ALPMVASSSL GTGIPRKSVS YMSLNLVDGG FTTGDNDSPS HSSIRILDDD NLIPSIRKKK
FRKKVTLEQG DTSSFKVMNL KLDLYKDKFK EKYNPELKIR VRFETYENLR RRFWAILLEQ
YNLNDKENAY DYFELIALLD TLGCGNSDEL VASFYEKLGR STWGGDLLSH GEIIDCLEEH
VNSAKSEGEY KIFEIDKCPI CLNKRLNKKI DRDIITHVAI CASKDWSIVN KLLVATYTTP
QSASRKWFSK VLIKMTYGKY VLGGNNANIL VQDRNTGLIM EEKMGVYVRL GIRLLYKGLD
KAKTKRIRIL LKKLSVKQGI KFDSPQSKND IDSFIKFHKL NLSECLETDP SKYASFNEFF
YRRLKQGARP IDCPNESQIV VSPADCRCTA FSDINSATEL WIKGKNFTIA KLFNGNFNNL
ENTDIYSASK CSIGIFRLAP QDYHRFHCPV DGTIQNIKNI DGEYYTVNPM AIRSELDVFG
ENVRAIIPIK TDHFGTVIMV AVGAMMVGSI VLTVGEGDAV KRGDEIGYFK FGGSTIILLF
EKRFFKFDSD LVNNSKSCVE TLIRVGQSIG HSPDVKEHKP ARIDFAKQTK DFKLNLIRVL
TGGDLNNASE LSNWESSNIK ITTEDMDELV QQQNVLDEEE EEED
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