| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40652 |
|---|
| Symbol | |
|---|
| ID | 4836772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 604215 |
|---|
| End bp | 605507 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640388087 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382878 |
|---|
| Protein GI | 150864161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.470816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAT CAAGTCTTTG CAAGCAGGCT TTGACGGCTT CGTCTATGAA TTACAAGCTG
GTACAGGCAA CAGCCATCAG AAGCTTCCAC GAGTCACAGA TCCATTTCAA CAAAGAACAA
GCACCACAAG GATCGCCTTT AAAGGTCTTT TTCGATACCT TCAAGAACGA AGTCAAGAAA
TCGAACGAGT TGAAGGAAAA TATCAAGGCT TTACAGGATG AGTCTGGAAG AATGGCTGAA
TCTGAAGCTT TCAAGAAGGC CAGAGAAGCT TATGAGACAG CACAGAAAGG TAGTAATGCT
GCTGGTAAAG TGCTCAAGCT GACTGCAGAC GTTGTAGGCG GTGCTGCTGT AAAAGCATGG
GATTCTCCTG TTGGTAAGGG AGTCAGAACT ACAGTACGTG TAAGTGCTGA AGTAGCAGAC
AAAGCCTTTG AGCCTGTAAG ACAGACACAA GTCTACAAGG ATGTTTCTGA AGTTATTGAT
GATGGTTCGT CGACTTCATA TGGTGGATTT TTGACAAAGG AGCAGAGACA GAGATTGAGA
GAGAAGGAAT TGGAGGAAAG AGCCAGAAAG GGAGTCAAGG GTCCTGTTCG TGAGAACGAA
GAGGCTGGCG GAGAGTTAGT AGCCACTGAA CATAAGGCTT CAGGTCCATC TGTTGGTGAA
AGATGGGAAG AGTACAAACT TAAAACACCT GTGGGCCGTT TCTTTACGTA CTTGCAAGAG
AAATGGCAGG ACTCTGAGAA TGGCTTGATT TCACTTATAA GAACCATCAT TGAAAAAGTA
ACAGGGTTCT TTGCCGAAAC TGAACAAGCC AAGGTGGTTA AGCAATTTAG AATGATGGAT
CCTTCTTTCC GTTTAACCGA CTTCCAGAAG ACATTGACCA ACTACATTGT GCCCGAGATC
TTAGATGCCT ACATCAAGAA CGACGAAACC GTGTTGAAGC AATGGTTCTC CGAAGCTCCC
TTCAACGTCT GGCAAGCCAA CAATAAGCAG TTCATCCAAC AGGGCTTGTT CCTGGACGGT
CGTATCTTAG ATATCCGTGG TGTTGAAGTA GTCACATGCA AGCAGTTGCA ACCTAACGAT
ACTCCTGTCA TTGTTGTCAG TTGTCGTGCC CAAGAGGTTC ATTTGTACCG TAAGGCTAAG
ACAGGTGACA TTGCTGCAGG TACCGAGGAT CATATCCAGT TGAGCACATA CGCTATGGTT
CTTACAAGAG TTCCAGAAGA ATTCGACAAC GCCACTACGG AAGGATGGAA GATCATAGAG
TTCGCTCGTG GTGGTTCCAG ACCTTTCCAT TGA
|
|---|
| Protein sequence | MMKSSLCKQA LTASSMNYKS VQATAIRSFH ESQIHFNKEQ APQGSPLKVF FDTFKNEVKK
SNELKENIKA LQDESGRMAE SEAFKKAREA YETAQKGSNA AGKVLKSTAD VVGGAAVKAW
DSPVGKGVRT TVRVSAEVAD KAFEPVRQTQ VYKDVSEVID DGSSTSYGGF LTKEQRQRLR
EKELEERARK GVKGPVRENE EAGGELVATE HKASGPSVGE RWEEYKLKTP VGRFFTYLQE
KWQDSENGLI SLIRTIIEKV TGFFAETEQA KVVKQFRMMD PSFRLTDFQK TLTNYIVPEI
LDAYIKNDET VLKQWFSEAP FNVWQANNKQ FIQQGLFSDG RILDIRGVEV VTCKQLQPND
TPVIVVSCRA QEVHLYRKAK TGDIAAGTED HIQLSTYAMV LTRVPEEFDN ATTEGWKIIE
FARGGSRPFH
|
|---|
| |