| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40548 |
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| Symbol | |
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| ID | 4837132 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1400419 |
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| End bp | 1401948 |
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| Gene Length | 1530 bp |
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| Protein Length | 455 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388447 |
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| Product | predicted protein |
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| Protein accession | XP_001382490 |
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| Protein GI | 150863867 |
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| COG category | [B] Chromatin structure and dynamics
[K] Transcription |
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| COG ID | [COG5076] Transcription factor involved in chromatin remodeling, contains bromodomain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000490201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.498947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGATA GGAAAAGGGC CGCTGCGGTG GTCAAATCTG AAGATGAGGA CAATGATGAT
GTTCCTTTGA ACAAGAAGGT CAAGATGGAG GCTAAACAGG AAAGTTCCAG CGAGGACGAA
GAAGACGACG ACGACGAAGA CGAAGACGAG AGAAAGGAAC CTGATTCCGA GTATAATGAA
TTTGAAGAAA ATGAAAACGA AGAAGAAAAC GAGAATGAAA ACGAGAATGA AGAAGAAAAT
GAAGAAAACC ACGAAAATGG AAATGAGGAT GAAAATGATA ATGAAAATGA CAATCAGAAT
GAAATCGAAA ATGAAAATCC AAATCATGAA AGTGACGATA AGAAAGATGT AAAAGATGAG
GGAGATGAAG ATGAAGATGA GAATGACGAT GGAGAAGACG ACGACGAAGC TGAGGAAGAA
AGAAAGAGAA TTACTACTTT CAACTTTGAC GGGGAATCGT ACTCGTTCAA AGAAAGACCT
TCCGTGATAG AAGAGAAGGA AGGCAAGATA GAGTTTCGTG TAGTCAACAA CGACAACACA
CGTGAAAACC TAATTGTACT CACGGGGTTG AAAAACATTT TCCAGAAACA ATTGCCCAAG
ATGCCGAGAG AGTATATCTC AAGATTGGTG TATGACAGAT CCCATTTATC GATGGCTGTA
GTCCGTAAGC CGTTGACTGT TGTAGGTGGT ATAACGTACC GTCCGTTTAA CAACCGTGAG
TTCGCCGAAA TTGTGTTCTG TGCCATTTCG CTGACGGAAC AAGTTCGGGG TTATGGTGCA
CACTTGATGA ACCACTTGAA GGATTACGTT AGAGCCACAT CGCCCATCAA GTACTTTCTT
ACTTATGCCG ATAACTATGC TATAGGTTAT TTCAAGAAGC AGGGATTCAC CAAAGAAATC
ACCTTGGACA AGTCTGTGTG GATGGGGTAC ATCAAAGATT ATGAGGGAGG AACACTTATG
CAGTGTTCGA TGCTACCTTC CATTCTCCGA TATTTGGATC TGGGCAAGAT CCTCTTGCTC
CAGAAAGCTG CAATCGAAAA GAAAATCAAA ATGAGATCAA AGTCTCACGT GGTCAGACCC
GGACTTCAAG TCTTCAAAAC GAACAAGAAC ATAACAGTAG ACCCCAAGGA TATTCCAGGA
CTCTTGGAGA GTGGCTGGCT GGAGGAAATG GACAAGTTGG CGCAGAAGCC AAAAAGAGGT
CCTCACTACA ATTTTATGGT GACGTTGTTC TCAGAAATGA CCAACCATCC ACTGGCTTGG
CCATTTGCTG TTCCGGTTAA TAAGGAAGAA GTTCAAGACT ACTACGAAGT CATAAAGGAA
CCGATGGACT TGTCTACTAT GGAACTGAAA TTAGAAAACG ACAAGTACGA TTCGTTTGAC
CAGTTTTTGT ACGATTGTCG TCTTATCTTC AAAAACTGTA GATCTTACAA TGGCGAGTCC
ACCACGTACT TTAAGAACGC CAACAAATTG GAGAAGTTCC TTAACAATAA GATCAAGGAT
AGTGCTGAGT ATGCCCATTT CTTGGATTGA
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| Protein sequence | MVDRKRAAAV VKSEDEDNDD VPLNKKVKME AKQESSSEDE EDDDDEDEDE RKEPDSDDDK
KDVKDEGDED EDENDDGEDD DEAEEERKRI TTFNFDGESY SFKERPSVIE EKEGKIEFRV
VNNDNTRENL IVLTGLKNIF QKQLPKMPRE YISRLVYDRS HLSMAVVRKP LTVVGGITYR
PFNNREFAEI VFCAISSTEQ VRGYGAHLMN HLKDYVRATS PIKYFLTYAD NYAIGYFKKQ
GFTKEITLDK SVWMGYIKDY EGGTLMQCSM LPSILRYLDS GKILLLQKAA IEKKIKMRSK
SHVVRPGLQV FKTNKNITVD PKDIPGLLES GWSEEMDKLA QKPKRGPHYN FMVTLFSEMT
NHPSAWPFAV PVNKEEVQDY YEVIKEPMDL STMESKLEND KYDSFDQFLY DCRLIFKNCR
SYNGESTTYF KNANKLEKFL NNKIKDSAEY AHFLD
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