Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_40548 |
Symbol | |
ID | 4837132 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1400419 |
End bp | 1401948 |
Gene Length | 1530 bp |
Protein Length | 455 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388447 |
Product | predicted protein |
Protein accession | XP_001382490 |
Protein GI | 150863867 |
COG category | [B] Chromatin structure and dynamics [K] Transcription |
COG ID | [COG5076] Transcription factor involved in chromatin remodeling, contains bromodomain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000490201 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.498947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATA GGAAAAGGGC CGCTGCGGTG GTCAAATCTG AAGATGAGGA CAATGATGAT GTTCCTTTGA ACAAGAAGGT CAAGATGGAG GCTAAACAGG AAAGTTCCAG CGAGGACGAA GAAGACGACG ACGACGAAGA CGAAGACGAG AGAAAGGAAC CTGATTCCGA GTATAATGAA TTTGAAGAAA ATGAAAACGA AGAAGAAAAC GAGAATGAAA ACGAGAATGA AGAAGAAAAT GAAGAAAACC ACGAAAATGG AAATGAGGAT GAAAATGATA ATGAAAATGA CAATCAGAAT GAAATCGAAA ATGAAAATCC AAATCATGAA AGTGACGATA AGAAAGATGT AAAAGATGAG GGAGATGAAG ATGAAGATGA GAATGACGAT GGAGAAGACG ACGACGAAGC TGAGGAAGAA AGAAAGAGAA TTACTACTTT CAACTTTGAC GGGGAATCGT ACTCGTTCAA AGAAAGACCT TCCGTGATAG AAGAGAAGGA AGGCAAGATA GAGTTTCGTG TAGTCAACAA CGACAACACA CGTGAAAACC TAATTGTACT CACGGGGTTG AAAAACATTT TCCAGAAACA ATTGCCCAAG ATGCCGAGAG AGTATATCTC AAGATTGGTG TATGACAGAT CCCATTTATC GATGGCTGTA GTCCGTAAGC CGTTGACTGT TGTAGGTGGT ATAACGTACC GTCCGTTTAA CAACCGTGAG TTCGCCGAAA TTGTGTTCTG TGCCATTTCG CTGACGGAAC AAGTTCGGGG TTATGGTGCA CACTTGATGA ACCACTTGAA GGATTACGTT AGAGCCACAT CGCCCATCAA GTACTTTCTT ACTTATGCCG ATAACTATGC TATAGGTTAT TTCAAGAAGC AGGGATTCAC CAAAGAAATC ACCTTGGACA AGTCTGTGTG GATGGGGTAC ATCAAAGATT ATGAGGGAGG AACACTTATG CAGTGTTCGA TGCTACCTTC CATTCTCCGA TATTTGGATC TGGGCAAGAT CCTCTTGCTC CAGAAAGCTG CAATCGAAAA GAAAATCAAA ATGAGATCAA AGTCTCACGT GGTCAGACCC GGACTTCAAG TCTTCAAAAC GAACAAGAAC ATAACAGTAG ACCCCAAGGA TATTCCAGGA CTCTTGGAGA GTGGCTGGCT GGAGGAAATG GACAAGTTGG CGCAGAAGCC AAAAAGAGGT CCTCACTACA ATTTTATGGT GACGTTGTTC TCAGAAATGA CCAACCATCC ACTGGCTTGG CCATTTGCTG TTCCGGTTAA TAAGGAAGAA GTTCAAGACT ACTACGAAGT CATAAAGGAA CCGATGGACT TGTCTACTAT GGAACTGAAA TTAGAAAACG ACAAGTACGA TTCGTTTGAC CAGTTTTTGT ACGATTGTCG TCTTATCTTC AAAAACTGTA GATCTTACAA TGGCGAGTCC ACCACGTACT TTAAGAACGC CAACAAATTG GAGAAGTTCC TTAACAATAA GATCAAGGAT AGTGCTGAGT ATGCCCATTT CTTGGATTGA
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Protein sequence | MVDRKRAAAV VKSEDEDNDD VPLNKKVKME AKQESSSEDE EDDDDEDEDE RKEPDSDDDK KDVKDEGDED EDENDDGEDD DEAEEERKRI TTFNFDGESY SFKERPSVIE EKEGKIEFRV VNNDNTRENL IVLTGLKNIF QKQLPKMPRE YISRLVYDRS HLSMAVVRKP LTVVGGITYR PFNNREFAEI VFCAISSTEQ VRGYGAHLMN HLKDYVRATS PIKYFLTYAD NYAIGYFKKQ GFTKEITLDK SVWMGYIKDY EGGTLMQCSM LPSILRYLDS GKILLLQKAA IEKKIKMRSK SHVVRPGLQV FKTNKNITVD PKDIPGLLES GWSEEMDKLA QKPKRGPHYN FMVTLFSEMT NHPSAWPFAV PVNKEEVQDY YEVIKEPMDL STMESKLEND KYDSFDQFLY DCRLIFKNCR SYNGESTTYF KNANKLEKFL NNKIKDSAEY AHFLD
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