Gene PICST_40336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_40336 
Symbol 
ID4836943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp896606 
End bp896944 
Gene Length339 bp 
Protein Length112 aa 
Translation table12 
GC content47% 
IMG OID640388258 
Productpredicted protein 
Protein accessionXP_001382943 
Protein GI126132836 
COG category[K] Transcription 
COG ID[COG5204] Transcription elongation factor SPT4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCA GATCAGAAAG AGCGTGTATG CTCTGTGGGA TCGTCCAGCC CATGAAGAGG 
TTTGTCGACT ACGGCTGTCC CAACTGTGAA TCACTTTTGC ATTTTCAAGA TAATGAAGAA
GGACAAGTTC AGGATTGCAC ATCTCCTTCT TTCGAAGGGT TGGTTGCCTT GGGTCAGGAC
AACAGAAACT CGTGGGTAGC CAGATGGTTA CGTATTGACT CGTTTAACCC TGGACTTTAT
GCGGTCAAGG TGAATGGAAA GTTGCCTCCT CATATCATCA GTGACTTGGA AGCCCAGGAT
GTGATATACA GACCCAGAGA TGGAAGTGCC GAGGATTAG
 
Protein sequence
MSSRSERACM LCGIVQPMKR FVDYGCPNCE SLLHFQDNEE GQVQDCTSPS FEGLVALGQD 
NRNSWVARWL RIDSFNPGLY AVKVNGKLPP HIISDLEAQD VIYRPRDGSA ED