Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_40336 |
Symbol | |
ID | 4836943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 896606 |
End bp | 896944 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640388258 |
Product | predicted protein |
Protein accession | XP_001382943 |
Protein GI | 126132836 |
COG category | [K] Transcription |
COG ID | [COG5204] Transcription elongation factor SPT4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCA GATCAGAAAG AGCGTGTATG CTCTGTGGGA TCGTCCAGCC CATGAAGAGG TTTGTCGACT ACGGCTGTCC CAACTGTGAA TCACTTTTGC ATTTTCAAGA TAATGAAGAA GGACAAGTTC AGGATTGCAC ATCTCCTTCT TTCGAAGGGT TGGTTGCCTT GGGTCAGGAC AACAGAAACT CGTGGGTAGC CAGATGGTTA CGTATTGACT CGTTTAACCC TGGACTTTAT GCGGTCAAGG TGAATGGAAA GTTGCCTCCT CATATCATCA GTGACTTGGA AGCCCAGGAT GTGATATACA GACCCAGAGA TGGAAGTGCC GAGGATTAG
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Protein sequence | MSSRSERACM LCGIVQPMKR FVDYGCPNCE SLLHFQDNEE GQVQDCTSPS FEGLVALGQD NRNSWVARWL RIDSFNPGLY AVKVNGKLPP HIISDLEAQD VIYRPRDGSA ED
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