| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40322 |
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| Symbol | ERP1 |
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| ID | 4837146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1212550 |
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| End bp | 1213290 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388461 |
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| Product | emp24/gp25L/p24 family of membrane trafficking proteins |
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| Protein accession | XP_001382448 |
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| Protein GI | 150863837 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.737059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTTTGG CGATAATACT ATGGCTGGTT CTATTTCTAG CATCACCCAT ACTGGGGCTT
CTCCATTTCT ACGCTGCTGC TGGTGTACGT ACTTGTTTCT ACAAGGAACT CGGCCAGAAA
TCGCTACTTG TAGGAAGATA CAAGGTAGAA ATTCGTGACG AGGACACAGA GATCTACTAT
CCGCCACGAA ATCGTCACAA TATAGGAGCT CTTATAGATG TTGAGGAAAC TTTTGACTCC
AACCATCGTG TAGTTCATCA GAAAGGCGCT GCCATAGGTC AGTTCACATT CAGCGCATTA
GACTCAGGAG ACCATCGGAT CTGTATAACG CCCAGAAGCT TCTACAGCAA GAAAAGTAAA
TGGTACGGTG GCAATGCCAA CAGCGGATCT TCTCATGAGG ACGAAGAAGC TGAACAATTC
GATATAAAAG ACCTGAAGTT CAGACACGCT CGTATAACAA TCGACTTTTT GATCAGCGAC
GAGTTTAGTG CAGATTCCAA ACACTCACAA TCAGTCGAAA CCCTTGCTTC ACAAGTTAAC
CGGCTCAATG ATAAACTCAC GGATATCAAA CGAGAACAAA AGTTCATTCG TGAGAAAGAG
GCTGTTTTCA GGGATCTCTC AGAAAGCACC TGTGGGATTG TAATCCGCTG GCTGATTATC
CAGCTAGGAG CACTTGGTGT GATTTGTGTC TATCAGCTAT TGTCACTTCT GCGGTTCTTT
GTCAAACAAA AAGTATCATA A
|
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| Protein sequence | MVLAIILWSV LFLASPISGL LHFYAAAGVR TCFYKELGQK SLLVGRYKVE IRDEDTEIYY
PPRNRHNIGA LIDVEETFDS NHRVVHQKGA AIGQFTFSAL DSGDHRICIT PRSFYSKKSK
WYGGNANSGS SHEDEEAEQF DIKDSKFRHA RITIDFLISD EFSADSKHSQ SVETLASQVN
RLNDKLTDIK REQKFIREKE AVFRDLSEST CGIVIRWSII QLGALGVICV YQLLSLSRFF
VKQKVS
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