Gene PICST_35345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35345 
Symbol 
ID4836775 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2693428 
End bp2693943 
Gene Length516 bp 
Protein Length160 aa 
Translation table12 
GC content42% 
IMG OID640388090 
Productpredicted protein 
Protein accessionXP_001383269 
Protein GI126133488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.574986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACA ATGTCAGCAA AGACGTGCTG CTAATTGAGC AAGAGGAAGA CCAATCGTAT 
GGAGTTCAAG TATATGTGTA TGACTTATCT AATGGATTAG CAGCCGTATA CTCGCCAATG
ATTCTTGGAA TCAACCTAGA TGCCATCTAC CACACCTCGG TGGTGATATA CAACAAGGAG
CATTACATAG ACCAGGGGAT AAAAGTCAAT AGTCCGCCCG GATACACCAA GTATGGTACT
CCGATCGAGA TTATCGATAT GGGAGACACT TTTATAAATG AAGAAATCTT TCAAGAATTC
TTAGATGAGC TCAGAAATCA CGATAAATTG AAATATCATG CAATAAACTA CGACTTGTTT
GACAATAACT GCAACCATTT CACTGATGTT TTGTTGGATT TTTTGGTGGG CAAGAACTTG
GACGACCGGA TCTTAAAGTT ACCACAGCAG GTATTGGGAA CGCCGAGTGG ACAGATGTTG
AGGCAGATGA TCGGAGCCGG AGGAATGTAT AGATAG
 
Protein sequence
MADNEDQSYG VQVYVYDLSN GLAAVYSPMI LGINLDAIYH TSVVIYNKEH YIDQGIKVNS 
PPGYTKYGTP IEIIDMGDTF INEEIFQEFL DELRNHDKLK YHAINYDLFD NNCNHFTDVL
LDFLVGKNLD DRILKLPQQV LGTPSGQMLR QMIGAGGMYR