Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_35327 |
Symbol | |
ID | 4837529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2646733 |
End bp | 2648028 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640388844 |
Product | predicted protein |
Protein accession | XP_001382741 |
Protein GI | 126132432 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTGCG CAGCTAGTGT TCCAGAAAAC GAGGAAAAGG ATCCTTTTCT TCACGATAAA CGCATCAATG ATGCCATCGA ACAGAATCTC CAGCTCAATA AGCAGAATGA GAAAAACCAA GTCAAGCTCT TGCTTCTCGG GGCAGGAGAA AGTGGAAAAT CTACAGTGCT AAAGCAGATG AAACTTCTAC ATAAGGGGGG ATTCACACAG CAGGAACGAA TCCAGTACTC CCAGGTTATC TGGTGTGACG TTGTTCAATC CATGAAGATC CTTATAGTCC AAGCCCGAAA GCTTGGAATC GCACTCGATT GCGATCAAGA AAACAGTCCT CTAATTCCAT ATAAGCAGAT TGTTCTTCGA GCGAATGCCT TGGAACAAAT TGATACAGGC GCAGCAGGAG GAGCACACTT CATGAACGAC TATGTGTTGA AGTACAGTGA AGTGCAAAAA AACAAGCGCA GAATGAACAG CACGGGTGTA GCCAACATCT CATACTGGGA CGATCCTCCT GTTAAATCAG ATCATGAAAG TGATAATGTC AACGTCGTCT ACAACAGCAC AAACCCAACT CCAAATAGCA CCTATTCGAG AGAGCAAATC GCTGATGCTA TTCATAAGTT GTGGACGTCC GATCCCGGAA TCCATAATTG TTACGAACGG TCCAACGAGT TTCAATTTGA AGCCAGTGCT GAGTACTACT TTGAGAATGT TTACAAGTTT GCTGACCCTG ATTACTACTG TACTGATACT GATATCTTGA AGGGCCGTAT AAAGACCACA GGAATCACCG AGACAAACTT CAACATCAAC TCATTCAAGT TCAAGGTGTT GGATGCTGGA GGACAACGTT CAGAACGTAG AAAATGGATA CATTGCTTTG ACAATATCAC TGCAGTTTTA TTCGTGCTCG CCATCTCAGA ATACGACCAG ATGTTGTTTG AAGATGAGAG AGTCAACCGG TTGCACGAGT CGATTGTGTT ATTCGACTCG TTGTGTAATT CCAAGTGGTT TGCCAATACC CCCTTTATTC TCTTTCTTAA CAAAACCGAT ATATTCGAAA AAAAGATCCA ACGATCGCCG TTGAAGCAGT ACTATCCCGA GTACAACGGC AAGCCCCAAG ACTCGGCTGA GGCTATGAAG TTCTTTGAAA CCAACTTCTT GAAACTTAAC CGAACAAATA AACCCATCTA TGTGCATCGC ACCTGTGCCA CAGACTCCAA GTCAATGAAG TTTGTATTAT CGGCCGTAAC CGATGTGATT GTGCAGCAGA ATCTCAAGAA GAGCGGAATC ATGTAG
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Protein sequence | MGCAASVPEN EEKDPFLHDK RINDAIEQNL QLNKQNEKNQ VKLLLLGAGE SGKSTVLKQM KLLHKGGFTQ QERIQYSQVI WCDVVQSMKI LIVQARKLGI ALDCDQENSP LIPYKQIVLR ANALEQIDTG AAGGAHFMND YVLKYSEVQK NKRRMNSTGV ANISYWDDPP VKSDHESDNV NVVYNSTNPT PNSTYSREQI ADAIHKLWTS DPGIHNCYER SNEFQFEASA EYYFENVYKF ADPDYYCTDT DILKGRIKTT GITETNFNIN SFKFKVLDAG GQRSERRKWI HCFDNITAVL FVLAISEYDQ MLFEDERVNR LHESIVLFDS LCNSKWFANT PFILFLNKTD IFEKKIQRSP LKQYYPEYNG KPQDSAEAMK FFETNFLKLN RTNKPIYVHR TCATDSKSMK FVLSAVTDVI VQQNLKKSGI M
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