Gene PICST_35327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35327 
Symbol 
ID4837529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2646733 
End bp2648028 
Gene Length1296 bp 
Protein Length431 aa 
Translation table12 
GC content44% 
IMG OID640388844 
Productpredicted protein 
Protein accessionXP_001382741 
Protein GI126132432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGCG CAGCTAGTGT TCCAGAAAAC GAGGAAAAGG ATCCTTTTCT TCACGATAAA 
CGCATCAATG ATGCCATCGA ACAGAATCTC CAGCTCAATA AGCAGAATGA GAAAAACCAA
GTCAAGCTCT TGCTTCTCGG GGCAGGAGAA AGTGGAAAAT CTACAGTGCT AAAGCAGATG
AAACTTCTAC ATAAGGGGGG ATTCACACAG CAGGAACGAA TCCAGTACTC CCAGGTTATC
TGGTGTGACG TTGTTCAATC CATGAAGATC CTTATAGTCC AAGCCCGAAA GCTTGGAATC
GCACTCGATT GCGATCAAGA AAACAGTCCT CTAATTCCAT ATAAGCAGAT TGTTCTTCGA
GCGAATGCCT TGGAACAAAT TGATACAGGC GCAGCAGGAG GAGCACACTT CATGAACGAC
TATGTGTTGA AGTACAGTGA AGTGCAAAAA AACAAGCGCA GAATGAACAG CACGGGTGTA
GCCAACATCT CATACTGGGA CGATCCTCCT GTTAAATCAG ATCATGAAAG TGATAATGTC
AACGTCGTCT ACAACAGCAC AAACCCAACT CCAAATAGCA CCTATTCGAG AGAGCAAATC
GCTGATGCTA TTCATAAGTT GTGGACGTCC GATCCCGGAA TCCATAATTG TTACGAACGG
TCCAACGAGT TTCAATTTGA AGCCAGTGCT GAGTACTACT TTGAGAATGT TTACAAGTTT
GCTGACCCTG ATTACTACTG TACTGATACT GATATCTTGA AGGGCCGTAT AAAGACCACA
GGAATCACCG AGACAAACTT CAACATCAAC TCATTCAAGT TCAAGGTGTT GGATGCTGGA
GGACAACGTT CAGAACGTAG AAAATGGATA CATTGCTTTG ACAATATCAC TGCAGTTTTA
TTCGTGCTCG CCATCTCAGA ATACGACCAG ATGTTGTTTG AAGATGAGAG AGTCAACCGG
TTGCACGAGT CGATTGTGTT ATTCGACTCG TTGTGTAATT CCAAGTGGTT TGCCAATACC
CCCTTTATTC TCTTTCTTAA CAAAACCGAT ATATTCGAAA AAAAGATCCA ACGATCGCCG
TTGAAGCAGT ACTATCCCGA GTACAACGGC AAGCCCCAAG ACTCGGCTGA GGCTATGAAG
TTCTTTGAAA CCAACTTCTT GAAACTTAAC CGAACAAATA AACCCATCTA TGTGCATCGC
ACCTGTGCCA CAGACTCCAA GTCAATGAAG TTTGTATTAT CGGCCGTAAC CGATGTGATT
GTGCAGCAGA ATCTCAAGAA GAGCGGAATC ATGTAG
 
Protein sequence
MGCAASVPEN EEKDPFLHDK RINDAIEQNL QLNKQNEKNQ VKLLLLGAGE SGKSTVLKQM 
KLLHKGGFTQ QERIQYSQVI WCDVVQSMKI LIVQARKLGI ALDCDQENSP LIPYKQIVLR
ANALEQIDTG AAGGAHFMND YVLKYSEVQK NKRRMNSTGV ANISYWDDPP VKSDHESDNV
NVVYNSTNPT PNSTYSREQI ADAIHKLWTS DPGIHNCYER SNEFQFEASA EYYFENVYKF
ADPDYYCTDT DILKGRIKTT GITETNFNIN SFKFKVLDAG GQRSERRKWI HCFDNITAVL
FVLAISEYDQ MLFEDERVNR LHESIVLFDS LCNSKWFANT PFILFLNKTD IFEKKIQRSP
LKQYYPEYNG KPQDSAEAMK FFETNFLKLN RTNKPIYVHR TCATDSKSMK FVLSAVTDVI
VQQNLKKSGI M