Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_3529 |
Symbol | HYR6.3 |
ID | 4836797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2723119 |
End bp | 2724294 |
Gene Length | 1176 bp |
Protein Length | 392 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388112 |
Product | hyphally regulated cell wall protein |
Protein accession | XP_001382756 |
Protein GI | 150864067 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTTCTTGCTG CTGATATAAC TTCTCCAACA ATTGATAGAG GGGTTGTTAA CCTTTCCATT GGAGACATCA CAATTGAATC TGGTGCTTAC TGGTCCATTA TTGACAATGC AGTTTCTGTA CTTGCCGGTA ATTTAGATGT AAAGACTGAT GCTGGATTCT ACATTTCTTC AACCCAGAGT TTAATTGGTT TATCTGTTAC TCTTGCTTCT GGTTTAGGAT CGATCACTAA TGATGGTATT ATTGCATTTA ATTCGGTTGT CTCGTTGGTT GCTCCTAATT ACAACTTGAT TGGTCTCTCA TTCACAAACA ACGGAGAAAT GTATTTGGGT ACTAACGGCT CTGTTGTTGG AGCTCCCCCA ATCAACCTCA TTGCCCCAAG CTGGACTAAC ACAGGTTTGT TGGTGATCTA CCTGCAAACA AGAAGTGCAG ATGGTATTGT CAATCTCGGA GGAACTGGAT TGGTTATTCA AAACAATGGC CAAATCTGCT TAACTAATGA GCTTTACCAA GCTTCAACCC AAATTCGTGG TACTGGGTGT ATAACTGCAA ATCTAGATTC TTCAATTTTC TTGGCTAATG GTTTGTTAGG AGTTGATCAA TCTCAAACAT TTTATTTGGC TGACTCCAAA TCCTCCATCA GAGCAAATGC AATTGCTGTT CCACAAACGT TCACTGTTGC TGGTTTTGGT AACGGTAACA TTATTGGCTT AGATATTCCA CTTGCAACTG TCTTTCCACT TAGCTCGTGG AGTTATAGCT CAAGTACAGG TATTTTAACT CTAAGAGGTC TTGGTTTGTT GTCTCAAAAC TTTAACATTG GTCCAGGATA TAATAGCAAT TTGTTTTCAA TCACAACGGA TACCAGTCTT GGATTGGCCA GTGTTCCCTT AGGTGGTCTC ACTTATAGTG GTCCAGTACC AAACGCAATC CCTTCTAACT GTCTGCCTTG TAAGAATTTA CCAAGCGCAC CCGGTGCATC TCCAACTCTC ACTTCTACAA GTCTCACTAC CACCAAGACA GATGGATCAA TTTGCACTGA CGTTGATCAG ATACTCATTT CCACTGATGG ACAAGGTACT TGGTTTACAT CCACTTCCTT ATTATCCGAA ATTTGCAGCA CTATCCCAAA CTCCAAAACA ACAGTTATAT CTACTTGGAC GGGCACTGCT ACAAAA
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Protein sequence | VLAADITSPT IDRGVVNLSI GDITIESGAY WSIIDNAVSV LAGNLDVKTD AGFYISSTQS LIGLSVTLAS GLGSITNDGI IAFNSVVSLV APNYNLIGLS FTNNGEMYLG TNGSVVGAPP INLIAPSWTN TGLLVIYSQT RSADGIVNLG GTGLVIQNNG QICLTNELYQ ASTQIRGTGC ITANLDSSIF LANGLLGVDQ SQTFYLADSK SSIRANAIAV PQTFTVAGFG NGNIIGLDIP LATVFPLSSW SYSSSTGILT LRGLGLLSQN FNIGPGYNSN LFSITTDTSL GLASVPLGGL TYSGPVPNAI PSNCSPCKNL PSAPGASPTL TSTSLTTTKT DGSICTDVDQ ILISTDGQGT WFTSTSLLSE ICSTIPNSKT TVISTWTGTA TK
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