| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35277 |
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| Symbol | CDC42 |
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| ID | 4836688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2439822 |
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| End bp | 2440397 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640388003 |
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| Product | Cell division control protein 42 homolog |
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| Protein accession | XP_001382695 |
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| Protein GI | 126132340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.378034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAACCA TAAAGTGTGT TGTTGTCGGC GATGGTGCCG TCGGTAAAAC ATGTTTGTTG
ATCTCATATA CCACCAGCAA GTTCCCCGCT GACTATGTTC CTACCGTGTT CGATAACTAT
GCCGTCACCG TCATGATTGG TGACGAGCCT TTCACCTTGG GCTTGTTTGA TACCGCCGGA
CAAGAAGATT ACGACAGATT AAGACCCTTG TCCTATCCCT CTACCGATGT GTTCCTTGTT
TGTTTCTCGG TGATCGCCCC AGCATCTTTT GAAAACGTCA AAGAAAAATG GTTCCCAGAA
GTCCACCACC ATTGTCCTGG TGTCCCATGT TTAATTGTCG GTACTCAAAC CGATTTAAGA
CACGACGAGG TTATTTTACA AAGATTGCAT AGACAAAAGT TGTCGCCAAT CACCAACGAA
CAAGGTGAAA AATTGGCTAA GGAATTGAGA GCCGTCAAGT ACGTGGAATG TTCTGCCTTG
ACCCAAAGAG GCTTGAAGAC AGTGTTTGAC GAGGCCATTG TGGCTGCGTT AGAGCCACCT
GTGATCAAGA AGTCCAAGAA GTGTACCATT TTGTAA
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| Protein sequence | MQTIKCVVVG DGAVGKTCLL ISYTTSKFPA DYVPTVFDNY AVTVMIGDEP FTLGLFDTAG
QEDYDRLRPL SYPSTDVFLV CFSVIAPASF ENVKEKWFPE VHHHCPGVPC LIVGTQTDLR
HDEVILQRLH RQKLSPITNE QGEKLAKELR AVKYVECSAL TQRGLKTVFD EAIVAALEPP
VIKKSKKCTI L
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