Gene PICST_35251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35251 
SymbolSIW14.3 
ID4837268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2322479 
End bp2323924 
Gene Length1446 bp 
Protein Length481 aa 
Translation table12 
GC content41% 
IMG OID640388583 
Productputative tyrosine phosphatase 
Protein accessionXP_001382673 
Protein GI150864003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.218812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTAA CTCCAGACAA CTTTGGGCTT GTTGAGCCCG GAATTTACCG TTGTTCGAAG 
TTAGAACTGG ACAATTTTCC GTTTTTGGAA ACTCTCCAGT TGCTGTCGTT AGTTCTCTTG
GATGCTGAAA AACCACCCCG AGCTTTGAAC GATTTCATTC TGGCCCACAA GATCGAGTTG
TTTAGCTTGG GAAGACTCAA GATCTCGAAC CATCATCATA CAGGAGCGGA GGTTTCCAAC
AGTAAGGATG AAGACGATGA CGATGACACT CTTTCTACAA GCAGCAAAGG TTCCGATAAA
GGTAGCACAT CTATAAATAC ACAGCTAGAA GAAAGCAAGA ACGCGATTGA AGTAATCTCG
TTGAACATCA ACAAGAACAA GAATGACCAA TGGATGCTAA TAGAGAAGAA CCTCATTCTG
AGAGCTTTTG AGCTCTTGTT GAACAAACAC AAACATAATA TACTTCTTGT AGATTCGACA
GCCACGTTGA TCGGAATACT AAGAAAGATT CAGAAGTGGA ACTTCCTTTC CATTTTGAAT
GAGTACCGAA TCTATTCCGG AAGTTCGTCG AAGAACAATT ACTTTGCTGA GACGTTCTTG
GAGTTGATCC AGACAGAGTT AATTCCCTAC GAAATTGACC AGCTCAATCA GCAGGTGAAA
CAGCAACAGC AATATATTCA ACAACAAGAA GAACAGCAAC AGCAGCAACA GCAGCATGAA
CAAGAAAACG AAGATATTCC CAATGCTGAC TTCAAGTTGT CAGAAAGTCT TTTTAAACGC
CCGGAGTTCC TGAAAAGTAC TTCTCGTTCC AGTTCTATAA ATGGAATAAA CGAAGAAATA
TGGGACGAAG ACGATGTGAA CAGCATTGAT GATGACGATA TGGACGACGA TTTACTTTCT
GCATCACCTC AGATTCCAGC CAATTTGCTA AAACTTGTAG AACAGCGCAA ACAAGAGGAC
AAGAGAGACA TCGATTCTGA CAATGATAGC ACTCCTGGAA CTTCTCCCAA GTTGGGAAGA
ACCAGTAGAC ATGGTAGTTT TAACAATAAC GAAATATACT TGACCGCGGC CAGAATGAAT
CTTGAGCGCA GAAGATCTTC TATTGACTCC AAATTCATGA GAGCCAGTAA TAGCAAGTTC
CGCAATCAGC AATCTCCAAG ACCTATTCAT GCACAGAGGG CCTCGTTTGA TAGTGCTACC
CCCATAATAA AAAGAGGCAA AGATAAGGAC ATGTTACCTA AATTCATGAC TAATACAGAG
ATCGAAGCCA TCAGATACAA GTATGACTAT AAATACTACA AGAATCTAAA TAAGTATCCT
ACTACGTTTG AGAATGTCAG CGTTGTCAAG TTGAAGTTGC CAGCAGATAA TAAGTTGCCC
AAGTGGTTTA TACGGGGGCG TGATTTCTGG GAGGGTCATT ATAAGACGAC AAATGGAATA
GAATAG
 
Protein sequence
MLVTPDNFGL VEPGIYRCSK LESDNFPFLE TLQLSSLVLL DAEKPPRALN DFISAHKIEL 
FSLGRLKISN HHHTGAEVSN SKDEDDDDDT LSTSSKGSDK GSTSINTQLE ESKNAIEVIS
LNINKNKNDQ WMLIEKNLIS RAFELLLNKH KHNILLVDST ATLIGILRKI QKWNFLSILN
EYRIYSGSSS KNNYFAETFL ELIQTELIPY EIDQLNQQVK QQQQYIQQQE EQQQQQQQHE
QENEDIPNAD FKLSESLFKR PEFSKSTSRS SSINGINEEI WDEDDVNSID DDDMDDDLLS
ASPQIPANLL KLVEQRKQED KRDIDSDNDS TPGTSPKLGR TSRHGSFNNN EIYLTAARMN
LERRRSSIDS KFMRASNSKF RNQQSPRPIH AQRASFDSAT PIIKRGKDKD MLPKFMTNTE
IEAIRYKYDY KYYKNLNKYP TTFENVSVVK LKLPADNKLP KWFIRGRDFW EGHYKTTNGI
E