Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_35195 |
Symbol | |
ID | 4837171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1980043 |
End bp | 1981038 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640388486 |
Product | predicted protein |
Protein accession | XP_001382609 |
Protein GI | 150863953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0941522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGCGT GCTCGGACAT CTCGTATCTC TCAGGTATGT TCAGTACATT ATCTTGTACT TCCTGGATCT TTGCCCAGCT ACCTCAGATC ATCGAAAACT ACAAGAACAA GTCAGCCGAA GGCATTTCGC CAACCTTTTT GTTGCTCTGG TTCATGGGCG ATTTTTTAAG TTTCACCAGC TGTCTTTTGA ACGACGTCGT CCTTCAGTTC CAGATCTATT TGAGCATCTT CTTCTTGTGC AACGATATTA CTTTATGTTT CCAGTACTAC TACTACAACA GTGTTTATCC ACGCAAACAT GGATTGATGT ACCAGCCCAT AGCAACAGAA GCCGCAACAT TTGCAGATGC AGAAGGGAAT GCCGTGGACA TGCATTCGAG CTCCAATTCT GTCCACATAC GACACACCAG GAACTCCGAA AGCAAATGCC CTACGCCAGC AAGCAACACT AGTTCCACAT CTAGTAGCTA CAACTCTATA AACGACAACA AAACTTCAGT CCTCAAGGTA GCAGCTATCT CTACGATTCT CAATGCGGGA AGCTCAGCTG CTATGCCAAT TTTTGCCAAA GTTCTGACAG ATGACGATAC CGACGGGTAT TCTGGAAAAG AGACGTTAGC ACTAGTACTC GCCTGGGGAT GCACTTTAGT CTATATAAGC TCCAGATGCC CACAGCTATA CAAAAACTAC TTGAGAAAGT CGGTCGACGG AATATCACCA ATTCTTTTCG GCGCTGCTCT TTTAGGCAAT TTAACGTACA CCCTCTCCAT ATTGACCAGC TGTGAATTTG TATTTGGCGA TTCAAAGCTG GAGTTCATCA TGAAAGAATT GCCCTATATA CTAGGCTCGT CTGGAACCAT CGTTTTTGAC GTAGCCTATT TCTACCAGAA ATACTTGTAT AGATCCACAG GAAAAAATAC CCAAGTCATG ACGTTGGAAA ACTGGAGCTC TATCGACATG CACAATGATA GCAGCGAAAA CTCGGCCTTG GTATAG
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Protein sequence | MVACSDISYL SGMFSTLSCT SWIFAQLPQI IENYKNKSAE GISPTFLLLW FMGDFLSFTS CLLNDVVLQF QIYLSIFFLC NDITLCFQYY YYNSVYPRKH GLMYQPIATE AATFADAEGN AVDMHSSSNS VHIRHTRNSE SKCPTPASNT SSTSSSYNSI NDNKTSVLKV AAISTILNAG SSAAMPIFAK VSTDDDTDGY SGKETLALVL AWGCTLVYIS SRCPQLYKNY LRKSVDGISP ILFGAALLGN LTYTLSILTS CEFVFGDSKS EFIMKELPYI LGSSGTIVFD VAYFYQKYLY RSTGKNTQVM TLENWSSIDM HNDSSENSAL V
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