Gene PICST_35195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35195 
Symbol 
ID4837171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1980043 
End bp1981038 
Gene Length996 bp 
Protein Length331 aa 
Translation table12 
GC content44% 
IMG OID640388486 
Productpredicted protein 
Protein accessionXP_001382609 
Protein GI150863953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0941522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCGT GCTCGGACAT CTCGTATCTC TCAGGTATGT TCAGTACATT ATCTTGTACT 
TCCTGGATCT TTGCCCAGCT ACCTCAGATC ATCGAAAACT ACAAGAACAA GTCAGCCGAA
GGCATTTCGC CAACCTTTTT GTTGCTCTGG TTCATGGGCG ATTTTTTAAG TTTCACCAGC
TGTCTTTTGA ACGACGTCGT CCTTCAGTTC CAGATCTATT TGAGCATCTT CTTCTTGTGC
AACGATATTA CTTTATGTTT CCAGTACTAC TACTACAACA GTGTTTATCC ACGCAAACAT
GGATTGATGT ACCAGCCCAT AGCAACAGAA GCCGCAACAT TTGCAGATGC AGAAGGGAAT
GCCGTGGACA TGCATTCGAG CTCCAATTCT GTCCACATAC GACACACCAG GAACTCCGAA
AGCAAATGCC CTACGCCAGC AAGCAACACT AGTTCCACAT CTAGTAGCTA CAACTCTATA
AACGACAACA AAACTTCAGT CCTCAAGGTA GCAGCTATCT CTACGATTCT CAATGCGGGA
AGCTCAGCTG CTATGCCAAT TTTTGCCAAA GTTCTGACAG ATGACGATAC CGACGGGTAT
TCTGGAAAAG AGACGTTAGC ACTAGTACTC GCCTGGGGAT GCACTTTAGT CTATATAAGC
TCCAGATGCC CACAGCTATA CAAAAACTAC TTGAGAAAGT CGGTCGACGG AATATCACCA
ATTCTTTTCG GCGCTGCTCT TTTAGGCAAT TTAACGTACA CCCTCTCCAT ATTGACCAGC
TGTGAATTTG TATTTGGCGA TTCAAAGCTG GAGTTCATCA TGAAAGAATT GCCCTATATA
CTAGGCTCGT CTGGAACCAT CGTTTTTGAC GTAGCCTATT TCTACCAGAA ATACTTGTAT
AGATCCACAG GAAAAAATAC CCAAGTCATG ACGTTGGAAA ACTGGAGCTC TATCGACATG
CACAATGATA GCAGCGAAAA CTCGGCCTTG GTATAG
 
Protein sequence
MVACSDISYL SGMFSTLSCT SWIFAQLPQI IENYKNKSAE GISPTFLLLW FMGDFLSFTS 
CLLNDVVLQF QIYLSIFFLC NDITLCFQYY YYNSVYPRKH GLMYQPIATE AATFADAEGN
AVDMHSSSNS VHIRHTRNSE SKCPTPASNT SSTSSSYNSI NDNKTSVLKV AAISTILNAG
SSAAMPIFAK VSTDDDTDGY SGKETLALVL AWGCTLVYIS SRCPQLYKNY LRKSVDGISP
ILFGAALLGN LTYTLSILTS CEFVFGDSKS EFIMKELPYI LGSSGTIVFD VAYFYQKYLY
RSTGKNTQVM TLENWSSIDM HNDSSENSAL V