Gene PICST_35114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35114 
Symbol 
ID4837659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1616973 
End bp1617692 
Gene Length720 bp 
Protein Length239 aa 
Translation table12 
GC content45% 
IMG OID640388974 
Productpredicted protein 
Protein accessionXP_001382537 
Protein GI126132024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA TATTAGAAAA GTCTCTCGAC GAAATCATAG GTGAAAACAA GTCGTCAAGA 
AGACCCCATC GCCGGTCTGG CGGTCCTTCC AGAAGAGGAA ACCAGAGCAG AATACAGAAG
ACTCCATACA CCAGAGAAAG ACCCACCAAC AGCCATTCAA ATTATCGTCC TTCGTCTTCG
TCTTCATTGC CTGGCTATAT TAGAGAAATG TCGCATTCTC GCCCAGTCTT AAGAGTCAAA
AATATCCATC CAGACTTGAA TGGTGAAGAC TTGTCGAATT TATTTGGAAA CATATCAGCT
GTTGAGTTTG TCAAGTTCGA CAACAGAGAC GACAGTGTCG CCTACGTCTG TTTTGAAACT
GATAATACCC GAAGCAACGC AGCAGCCATC GAAAAATACA ACGGCAAAAA GGCTATGGGC
AATGTGTTGG TTGTAGAAAG TGCCACGTCC TTGGCTGATA GAATCTCAGG CCTTCCTACA
AATACAAGGA TTATCCGTGG CAAGAATGGT CCAGCTCCAG GAGGAAGGGA AAGAAAGATC
GGCCAAACAC CCGGAGGAAG GGAAAGGAAA AAGAAAGAGC CAAGACCTAA ACATGTTAAG
AAGTCTGCCG AAGATCTTGA TAATGAATTG ACTGCCTATA TGAACAACGG TGGTGACTCT
GGTGCCACGG AATCTGCCGA AACTGATTCT CAAAATATCG ACCAATCCAT GAAGGACTAG
 
Protein sequence
MSDILEKSLD EIIGENKSSR RPHRRSGGPS RRGNQSRIQK TPYTRERPTN SHSNYRPSSS 
SSLPGYIREM SHSRPVLRVK NIHPDLNGED LSNLFGNISA VEFVKFDNRD DSVAYVCFET
DNTRSNAAAI EKYNGKKAMG NVLVVESATS LADRISGLPT NTRIIRGKNG PAPGGRERKI
GQTPGGRERK KKEPRPKHVK KSAEDLDNEL TAYMNNGGDS GATESAETDS QNIDQSMKD