| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34985 |
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| Symbol | |
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| ID | 4836922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1051390 |
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| End bp | 1052505 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388237 |
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| Product | predicted protein |
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| Protein accession | XP_001382978 |
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| Protein GI | 126132906 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.127685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.13999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACTG CTCCATTAGA CTCAACCAAG TTGGTAATTG AGAAAACCAC TAATCCAAAG
GAAGTGTTGC CTAAGGAAAA ATTGGCATTT GGAAAGTCTT TCACTGACCA TATGTTGGAA
GTAGAATGGA CTGCTCAGAG CGGTTGGGGT ACTCCAAAAT TGTCGCCATA CCATAATTTT
TCACTCGATC CAGCCACCTG TGTGTTTCAT TACTCTTTCG AATTGTTTGA AGGTATGAAG
GCTTATCGTG ACAAGGATGG CAAGATCAGA ACATTCAGAT CAGACAAGAA CATGGAAAGA
ATGAACGGCT CTGCCGCCAG AGCATCGTTG CCAACTTTCG ATGGAGAAGA GTTCATGAAG
ATTATTGATA AGTTGTTGCT TGCTGATGAA AGGTTTGTGC CTGAAGGTTA TGGCTACTCA
TTGTACTTGA GACCAACTTT GATTGGTACA ACTCCTGCTT TGGGTGTGGC TGCTCCTGAT
AAGGCTCTAT TGTATGTAAT TGCATCTCCT GTGGGGCCAT ACTTTGCAGA AGGATTCAAG
CCTGTTTCCT TAGAAGCCAC TGACTATGCT GTAAGAGCCT GGCCAGGTGG TGTTGGAGCT
TTCAAATTGG GTGCCAACTA CGTCTCTTGT ATCCAGCCAC AAAGTGAGGC TGCCAAGAGA
GGTCATTCCC AGAACTTGTG GTTGTTCGGC GAAGAGGGTT ACATCACTGA AGTTGGTGCC
ATGAATGTAT TCTTTGTATT TCAGAATGCT GACGGCAAGA AGGAACTTGT CACTCCTCCT
TTGGATGGTA CTATTTTACC TGGTGTAACA AGAGACAGTA CCTTAACTTT GGCTAGAGAA
AAATTGAACT CAAACGAATG GATTGTATCC GAGCGCCCAT TGACAATCTA CGAAGTCAAG
GAAAGAGCAC TCAAGGGTGA GTTAGTGGAA GCCTTTGGTA CTGGTACTGC TGCAGTTGTG
TCTCCAATCA AGAACATCGA GCACCGTGGT GAAGCCATCG AGGTTCCAGT AGAAGATGGG
AAGGCTGGAG CTTTCACTAA GCAAATCAGC GAATGGATCA GAAGTATCCA GTACGGTGAA
GAGGATTTCA AGAACTGGTC GAGAGTTGCA AAATAA
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| Protein sequence | MTTAPLDSTK LVIEKTTNPK EVLPKEKLAF GKSFTDHMLE VEWTAQSGWG TPKLSPYHNF
SLDPATCVFH YSFELFEGMK AYRDKDGKIR TFRSDKNMER MNGSAARASL PTFDGEEFMK
IIDKLLLADE RFVPEGYGYS LYLRPTLIGT TPALGVAAPD KALLYVIASP VGPYFAEGFK
PVSLEATDYA VRAWPGGVGA FKLGANYVSC IQPQSEAAKR GHSQNLWLFG EEGYITEVGA
MNVFFVFQNA DGKKELVTPP LDGTILPGVT RDSTLTLARE KLNSNEWIVS ERPLTIYEVK
ERALKGELVE AFGTGTAAVV SPIKNIEHRG EAIEVPVEDG KAGAFTKQIS EWIRSIQYGE
EDFKNWSRVA K
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