Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34960 |
Symbol | GHC1 |
ID | 4837457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 873993 |
End bp | 874805 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640388772 |
Product | GTP cyclohydrolase I (GTP-CH-I) |
Protein accession | XP_001382404 |
Protein GI | 126131758 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0302] GTP cyclohydrolase I |
TIGRFAM ID | [TIGR00063] GTP cyclohydrolase I |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATA CTCCAGCTAA AAGCTCAGCC TCTAGCGAGC ACGAAGAACT CAACGGAACC TATTCTCCTA GACCCATTTT GCCCATCAAG AGATCAAAGC TCACTGGAAG TTCTGAATTC CATGTGGGTA CGCCTCTTCA GACTCGTGTA GCTTCTCCAT GTACATTGAA TCCCCCCATT GACAGTGACG GTTTGTCGTG GCCATCACAG GGAGCAAGAA AGAGAATCGA GCAGACACCA GAAGAGGCGG AAGCACGAGA AGCTCGTATA GCAGATGCCG TGAAAGTCAT TTTGCACGAG TTGGGTGAAG ATGTAGACAG AGAAGGTTTG CTTGAGACCC CGGAACGGTA TGCCAGAGCA ATGTTATTCT TCACCAAGGG CTATGAAGAT AACATTAGAG ATGTTATCAA GAGAGCTGTT TTTGAAGAGA ACCACGACGA GATGGTGATA GTGAGAGACA TTGAGATTTA TTCGTTGTGT GAGCACCACT TGGTTCCGTT TTTCGGCAAA GCCCATATTG CTTATATTCC CAACAAAAGA GTCTTGGGCC TTTCCAAGTT GGCCCGTTTG GCTGAGATGT ATGCCCGTAG ATTCCAGGTC CAGGAACGTT TGACGAAACA AATTGCCATG GCACTCTCTG AGATCTTGAG ACCTCGTGGT GTAGCTGTAG TAATTGAAGC TACTCACATG TGTATGGTCA GTCGAGGAGT TCAGAAGACA GGCTCTTCAA CCACTACCAG TTGTATGTTG GGCTGTTTCC GCGACCACCA AAAGACCAGG GAAGAGTTCT TAACGTTGTT GGGAAGAAAG TAG
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Protein sequence | MSDTPAKSSA SSEHEELNGT YSPRPILPIK RSKLTGSSEF HVGTPLQTRV ASPCTLNPPI DSDGLSWPSQ GARKRIEQTP EEAEAREARI ADAVKVILHE LGEDVDREGL LETPERYARA MLFFTKGYED NIRDVIKRAV FEENHDEMVI VRDIEIYSLC EHHLVPFFGK AHIAYIPNKR VLGLSKLARL AEMYARRFQV QERLTKQIAM ALSEILRPRG VAVVIEATHM CMVSRGVQKT GSSTTTSCML GCFRDHQKTR EEFLTLLGRK
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