| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34942 |
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| Symbol | |
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| ID | 4837287 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 777944 |
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| End bp | 779767 |
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| Gene Length | 1824 bp |
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| Protein Length | 471 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388602 |
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| Product | predicted protein |
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| Protein accession | XP_001382920 |
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| Protein GI | 150864195 |
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| COG category | [K] Transcription |
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| COG ID | [COG5576] Homeodomain-containing transcription factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.442314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCGG ATGAAAACAG CACAACCTCC AACAAGAGGA CTAGAGCATC TGGTGAGGCT
CTCGATTTCT TGCTCCAGGA ATTTGAAAAA AACCCCAACC CTTCCACAGA GCAACGGAAA
GATATCTCCA GCAAGACGAA CATGTCCGAA AAGGCCGTTC GGATCTGGTT TCAGAACCGT
AGAGCCAAAC TCCGGAAATT TGAACGGTTG AACCGTTTGC AGACTGGAGG TTCAAGCATT
CACTCGTCCC GTTCCAATAG CATCAGCAAT ATAAGCCCTA TCCACCCCAA CTATGGAAAC
CAGGCTATTC CCATCGAGAT CAACGAAAAG TACTGCTTTG TTGACTGCAC TTCACTTAGT
GTAGGCTCCT GGCAGAGGAT TAAGTCAGGT TACCATGACG AAAGACTGCT CCGTAACAAC
CTCATCAACT TGTCGCCCTT CACGATTAAC TCGGTAATGA CCAGTGTAGA TTTGCTAGTG
ATTTTGTCTA AGAAAAATTG CGAAATTAAC TATTTCTTCC TGGCCATCTC CAACAACTCC
AAGATCCTCT TCCGCATATT TTATCCTATA TCTTCTGTTG CTACCTGTTC TTTGCTCGAT
AATAATATCA CCAAAGAGAA CAGCGAGCTT CGTGTTAGTT TGACTCACCA GCCCAAGTTT
TCGGTGTACT TCTTCAACGG AATCAACTCA CAAGCTAACC AGTGGTCCAT CTGTGACGAT
TTCAGCGAAG GTCAACAAGT CAGTCAGGCT TACACTTCAG AAGGAGGTAC GTCCATTCCT
CACGTGTTGG TCGGAATCAA GAGCTCTTTG CAGTACTTGA ACTCGTTTAT AGCTGACAAC
AATAACCTGA CCTACTCACA ATTCCCGACC TCGGTAACAC CATCATTCCA ACAACCATTC
CAAGAAGACA ATACAAGCAG AAATTCCAAC ATCAATAATA CCAACAATAC CAGCAATATC
AATACTACTA AAATCAATAA TAATAATCAT GATTTCTTCA GTACGGAAGA TTTGCTCTGG
GATGAAACCT CATCTTTGGC TCCTACTAAT ACCAACAGAT CCAATACACC ATTGCCATTT
CCACAATCTT CCTCTGGTTC TATCAGCAAC GGCAGTCATT TGAGAAATGC CCAGATGTCT
GGATTCAGCC CGTTGGCCGA TTTCAACTCT GACACTTCTC CTAACTCCAT AGGTAGTACC
AACAGTAATC AAATCAATGT CAAGAACTCG AGCTCTCATA CTCCTGCCTT ACAACAACAC
CATCTGCTCC AGCTGGTGCC TCAATACCAG CCACATACCT CCACGTTCAA TTCTAGCGCG
AATACACCAC ATAGAATATA TTCGCGTCAT TCCATACCAC AGCATAACTC CCATAGCAAT
ATACCTGAAA CCAGTTCTGT TGATGGTTAC GACGTTTTCA ACACAGCAAA CACCCCCGAC
TTCTTCACTA CACTTAGTGG AGATGGCGGT CAGACTCCTT CCAATATGTT AAACCACGAG
AACAGCCCCT CCATGAACTC CCAAGGCCAT TCTAATGGTG TTAATAGTAA CACTATCTCT
ATTCATGCCT ATACACACCA GAACAATAAC CACAACGATT TCTTGGACTC AATACAAACG
TTTCCATCGT CGCATGACTT CGAATTTGGA CTTGGTGGGG ATTTGGCTTC CAACGGTGAA
ACTCCTTTGG GTGGAGCTTT TGATGGTGCT CCTAATGGTG GAAATGCTGC TGGTAACAAT
AATAGCAGTA ACAATAACAA TAATGCTACT AGTGGTGGCA CTTCCAGCAA CGTCGATAGC
TTTATAGACT TTGGCAGCCA CTGA
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| Protein sequence | MSSDENSTTS NKRTRASGEA LDFLLQEFEK NPNPSTEQRK DISSKTNMSE KAVRIWFQNR
RAKLRKFERL NRLQTGGSSI HSSRSNSISN ISPIHPNYGN QAIPIEINEK YCFVDCTSLS
VGSWQRIKSG YHDERSLRNN LINLSPFTIN SVMTSVDLLV ILSKKNCEIN YFFSAISNNS
KILFRIFYPI SSVATCSLLD NNITKENSEL RVSLTHQPKF SVYFFNGINS QANQWSICDD
FSEGQQVSQA YTSEGGTSIP HVLVGIKSSL QYLNSFIADN NNSTYSQFPT SMSGFSPLAD
FNSDTSPNSI GSTNSNQINV KNSSSHTPAL QQHHSLQSFS NTPDFFTTLS GDGGQTPSNM
LNHENSPSMN SQGHSNGVNS NTISIHAYTH QNNNHNDFLD SIQTFPSSHD FEFGLGGDLA
SNGETPLGGA FDGAPNGGNA AGNNNSSNNN NNATSGGTSS NVDSFIDFGS H
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