Gene PICST_34851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34851 
Symbol 
ID4837240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp442504 
End bp443268 
Gene Length765 bp 
Protein Length254 aa 
Translation table12 
GC content44% 
IMG OID640388555 
Productpredicted protein 
Protein accessionXP_001382318 
Protein GI150863746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.862936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGTG AGCAAGAGCA TTTCCACTCT CACAGCCATG GTGGACATGA TGGAGATGAT 
GATGGCCACA GTCACAGCCA CAGCCATGGT GATGATGGTC ACCAGCACAT TGCTCCTATT
CCAACAAACG CTTCGCAATC GTTGCTTTCC AAGATAGACA CCACTAAAGT AACAGCTTTG
AACATGGCAA ATCCTCCTGA CGAGGCTGCT AAGTTGTTCA GACGCCCGGA AGAAAGATAC
CGCTTGAAAC CAGTTGTCAA GTCCGACTGC GACGCTCAAC TTATCATCAA TATACCCTTT
CTCAATGCTT CAGCTAAGAT ATTCTCCTTG ATCTTGAGAA CTAACGGTGA CAAATTCTGT
CCGAAAACCA TAAAACTTTT CAAGAACGAT TCGAATATCG ACTTCGACAA CGTCGAGACA
AAAAAGCCGA CATTTGTCAT AACTCATCCT CGCATCGGAG TGTTGTACAA CGACGACGGA
AATGAAGAAA TCCCGGAATC TGTAGAAAAT GACAACGAGT TTGTAGAGCA TTACTTGCCA
CGTCACATCT TCACGGGAGT CCAGCAGTTG TCAGTGTTTA TTGAAAACAT CTACGATGAA
GACGAAGAAG AGGAGAGCCA TTTGCATTAT ATAGAGCTCA GAGGTGAGTA CACTGAATTG
AACAGAGAGC CAGTGATTAC TTTGTACGAG CTGGCAGCAA ACCCTGCCGA TCACAAAAAC
TTGACAAAAG TCGAGTACTC CAATGGATTT GAATTTGGAA GTTAG
 
Protein sequence
MSCEQEHFHS HSHGGHDGDD DGHSHSHSHG DDGHQHIAPI PTNASQSLLS KIDTTKVTAL 
NMANPPDEAA KLFRRPEERY RLKPVVKSDC DAQLIINIPF LNASAKIFSL ILRTNGDKFC
PKTIKLFKND SNIDFDNVET KKPTFVITHP RIGVLYNDDG NEEIPESVEN DNEFVEHYLP
RHIFTGVQQL SVFIENIYDE DEEEESHLHY IELRGEYTEL NREPVITLYE SAANPADHKN
LTKVEYSNGF EFGS