Gene PICST_34839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34839 
Symbol 
ID4837308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp373015 
End bp373761 
Gene Length747 bp 
Protein Length248 aa 
Translation table12 
GC content49% 
IMG OID640388623 
Productpredicted protein 
Protein accessionXP_001382304 
Protein GI150863736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCG AACTCGTCCT TTCTCCTGTA ATGCGCCCTG TGGTTATGGC CAAAGCAGTG 
TTGTTTCTGC CCCATAGAAG TGGATCCCGC TATGTTCCTA ACATCATTGA ACTTCCAGAA
GAAGGCATTT CACAATATGC TTTACTCAAA AGATTCGGTT CCGGTTCCAA GATCTTTGAT
GTCTATGACA CCCACGAAGG TGAAGAACCT TTGGGGCAAA AGGACCCAGC ACAGAGGTTG
TTCTGGCTTG TTAGATCGAG AGCGGTTAAA GGTGCCTACA AGATGTTCTC TTCTGCGATT
ACGGGTACCG GTCCAGAAGG AGAAGATGAG CCAGTTGCTG CAATCAGGGC TGGTCTCAGA
TCCAATGTCT TGCTCATCCG TGCACCCGAC GTTCCTGCTG CAGAACTTGG ATGGCATGTG
ATCAACCACA GAGTGGATGC TAACGACAGC TACAGAATGT TCACCTTAGC CGATGGATTC
ACCTACCAAT GGACCAACAG AGGCAAATGG CTAGAAAAAG TCCACAACTT GGGAGAGAAG
GAGTCAGAGA TCAGAGAGAG AGTCGGACAG GTTATTCCAC ATGGAGCCAA TGGGTTCACA
TTGAAGGTGG ACGAAACCAA GATCCCCAGA GAATTGGCTC TTTCTACAGC GCTCTGTTCG
TACATTGACC AATGGAATAC CAACATCGAG GTCGGTGGTA TCTACTACGC CAGACAACCT
GGCCAGGTGC GTTGGAAGAG AGATTAG
 
Protein sequence
MPIELVLSPV MRPVVMAKAV LFSPHRSGSR YVPNIIELPE EGISQYALLK RFGSGSKIFD 
VYDTHEGEEP LGQKDPAQRL FWLVRSRAVK GAYKMFSSAI TGTGPEGEDE PVAAIRAGLR
SNVLLIRAPD VPAAELGWHV INHRVDANDS YRMFTLADGF TYQWTNRGKW LEKVHNLGEK
ESEIRERVGQ VIPHGANGFT LKVDETKIPR ELALSTALCS YIDQWNTNIE VGGIYYARQP
GQVRWKRD