Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34839 |
Symbol | |
ID | 4837308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 373015 |
End bp | 373761 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 12 |
GC content | 49% |
IMG OID | 640388623 |
Product | predicted protein |
Protein accession | XP_001382304 |
Protein GI | 150863736 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATCG AACTCGTCCT TTCTCCTGTA ATGCGCCCTG TGGTTATGGC CAAAGCAGTG TTGTTTCTGC CCCATAGAAG TGGATCCCGC TATGTTCCTA ACATCATTGA ACTTCCAGAA GAAGGCATTT CACAATATGC TTTACTCAAA AGATTCGGTT CCGGTTCCAA GATCTTTGAT GTCTATGACA CCCACGAAGG TGAAGAACCT TTGGGGCAAA AGGACCCAGC ACAGAGGTTG TTCTGGCTTG TTAGATCGAG AGCGGTTAAA GGTGCCTACA AGATGTTCTC TTCTGCGATT ACGGGTACCG GTCCAGAAGG AGAAGATGAG CCAGTTGCTG CAATCAGGGC TGGTCTCAGA TCCAATGTCT TGCTCATCCG TGCACCCGAC GTTCCTGCTG CAGAACTTGG ATGGCATGTG ATCAACCACA GAGTGGATGC TAACGACAGC TACAGAATGT TCACCTTAGC CGATGGATTC ACCTACCAAT GGACCAACAG AGGCAAATGG CTAGAAAAAG TCCACAACTT GGGAGAGAAG GAGTCAGAGA TCAGAGAGAG AGTCGGACAG GTTATTCCAC ATGGAGCCAA TGGGTTCACA TTGAAGGTGG ACGAAACCAA GATCCCCAGA GAATTGGCTC TTTCTACAGC GCTCTGTTCG TACATTGACC AATGGAATAC CAACATCGAG GTCGGTGGTA TCTACTACGC CAGACAACCT GGCCAGGTGC GTTGGAAGAG AGATTAG
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Protein sequence | MPIELVLSPV MRPVVMAKAV LFSPHRSGSR YVPNIIELPE EGISQYALLK RFGSGSKIFD VYDTHEGEEP LGQKDPAQRL FWLVRSRAVK GAYKMFSSAI TGTGPEGEDE PVAAIRAGLR SNVLLIRAPD VPAAELGWHV INHRVDANDS YRMFTLADGF TYQWTNRGKW LEKVHNLGEK ESEIRERVGQ VIPHGANGFT LKVDETKIPR ELALSTALCS YIDQWNTNIE VGGIYYARQP GQVRWKRD
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