Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30412 |
Symbol | |
ID | 4836921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2734994 |
End bp | 2735710 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 12 |
GC content | 48% |
IMG OID | 640388236 |
Product | predicted protein |
Protein accession | XP_001382758 |
Protein GI | 150864069 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGACA AGAGAGCCAC CTCGGGAGAT TCTACATGGT CTATCGGTGG AGCTAGATGG GCATTTTTCG CTATCCTTTT CGTTCTTATC CTAATAGGAA TATTTGGAAC CTTGCGAGTC AACAAGAAAA GATTTCAGCT GGGTTCCCAA CCTCTCTATG GGACAAGATG GATGACTCCT CCATCATACA GACAGTCACA AACACAATAT GACCAACCTG TTAATATTAG AGACCCAGAT CTTCCTAGTA CTTACGTCCC GACCTACACC GCTGAGGCCA ATGAATACGA TATGGGACAT TACGACCAAG CAGGCAAATT CCACTCTAAT CCAAACGCGA GGGCCGCTCT GATGGCGCCT CCACCAAGTG CTCATCAAAG ACAGAATCCG GCTCACGGTG ATGCAATTCC AATCAGTTCT ACAGTGCCGG TTGGAGCATT GACAGATGAG GATGGCGATA TTTCCAGTCC AGCGGGTCCT CCTCCAGACT TGGAAAGTGG CACTGGTGAG TCCAGCGAAA GTCTTGGTGA TTTCTCTAGA CCACCAGGTC ACGCTCCGCC AGAACACACC AGCACCATTC CTGGGTCATT AAATCCTCCT TCCGACCCTC CTTGTGGTCA ATCTGAGGTA CGGAAGGGCT CTTCCTCTTC AAGCAAGATA GAAGCATCCT CAAGTTTTTC AGATGGCATT AATACGAAAG GTTCTGATAA GGATTAA
|
Protein sequence | MLDKRATSGD STWSIGGARW AFFAILFVLI LIGIFGTLRV NKKRFQSGSQ PLYGTRWMTP PSYRQSQTQY DQPVNIRDPD LPSTYVPTYT AEANEYDMGH YDQAGKFHSN PNARAASMAP PPSAHQRQNP AHGDAIPISS TVPVGALTDE DGDISSPAGP PPDLESGTGE SSESLGDFSR PPGHAPPEHT STIPGSLNPP SDPPCGQSEV RKGSSSSSKI EASSSFSDGI NTKGSDKD
|
| |