Gene PICST_30412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30412 
Symbol 
ID4836921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2734994 
End bp2735710 
Gene Length717 bp 
Protein Length238 aa 
Translation table12 
GC content48% 
IMG OID640388236 
Productpredicted protein 
Protein accessionXP_001382758 
Protein GI150864069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACA AGAGAGCCAC CTCGGGAGAT TCTACATGGT CTATCGGTGG AGCTAGATGG 
GCATTTTTCG CTATCCTTTT CGTTCTTATC CTAATAGGAA TATTTGGAAC CTTGCGAGTC
AACAAGAAAA GATTTCAGCT GGGTTCCCAA CCTCTCTATG GGACAAGATG GATGACTCCT
CCATCATACA GACAGTCACA AACACAATAT GACCAACCTG TTAATATTAG AGACCCAGAT
CTTCCTAGTA CTTACGTCCC GACCTACACC GCTGAGGCCA ATGAATACGA TATGGGACAT
TACGACCAAG CAGGCAAATT CCACTCTAAT CCAAACGCGA GGGCCGCTCT GATGGCGCCT
CCACCAAGTG CTCATCAAAG ACAGAATCCG GCTCACGGTG ATGCAATTCC AATCAGTTCT
ACAGTGCCGG TTGGAGCATT GACAGATGAG GATGGCGATA TTTCCAGTCC AGCGGGTCCT
CCTCCAGACT TGGAAAGTGG CACTGGTGAG TCCAGCGAAA GTCTTGGTGA TTTCTCTAGA
CCACCAGGTC ACGCTCCGCC AGAACACACC AGCACCATTC CTGGGTCATT AAATCCTCCT
TCCGACCCTC CTTGTGGTCA ATCTGAGGTA CGGAAGGGCT CTTCCTCTTC AAGCAAGATA
GAAGCATCCT CAAGTTTTTC AGATGGCATT AATACGAAAG GTTCTGATAA GGATTAA
 
Protein sequence
MLDKRATSGD STWSIGGARW AFFAILFVLI LIGIFGTLRV NKKRFQSGSQ PLYGTRWMTP 
PSYRQSQTQY DQPVNIRDPD LPSTYVPTYT AEANEYDMGH YDQAGKFHSN PNARAASMAP
PPSAHQRQNP AHGDAIPISS TVPVGALTDE DGDISSPAGP PPDLESGTGE SSESLGDFSR
PPGHAPPEHT STIPGSLNPP SDPPCGQSEV RKGSSSSSKI EASSSFSDGI NTKGSDKD