Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30179 |
Symbol | |
ID | 4836739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2157809 |
End bp | 2159662 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388054 |
Product | hypothetical protein |
Protein accession | XP_001382638 |
Protein GI | 150863977 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0761319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTAG TCATATATTT TACCGCAATA GCTACACTTA TTACTGCTGC ACTTGCATAC GAGACTGCTC TGAAGTTCTT TCACGTGGTT GCAAGAGATG AGAATGGTCG CTTGGTACAA ATCGGTTTTG AGGGCGAGTT AGTTGCTGGT TCTGAATCCG ACAATCCTAT TTATTTCTCC TTAGATTCTA ATGGCATTCT TAAGTTCGAC GATTTTATTG TGGCAAGGAA GGGTGGTAGA CTTATTGGAA CTAATAGGAA AGAGTTGCGC AATGCTGAAT GGGGTTTAGT TAATGGAAAC CAACTCAGCT TCAATGGAAA GAGAACTTTC CACATCTGTA GCGATCAACA AAATATAGTC AGCAAGAAGG GATATCTCAG CCTATCTTCT GGAGTAGGTT GCTCTTCTGT AGTTTTGGAG GCAGTCTTTG GAAAGTCATA TCTTCAGGAC AACCGGTGGA AAAAGAGGGC AGAATCTGAT ACACTTACAG AGACCTCTCC TCCATTTCCT GTCCCTAATC CATCAGATGA AGCACCAGTG GAGACGCCAG TGGAGACACC TGTTGAACCA CCAGTTGAAA CACCAGTGGA GACACCTATC GACACACCAG TTGAGACACC TGTTGAACCA CCTGTTGATA CACCTGTTGA TACACCAGTT GAGACACCAG TTGAGACACC AATCGACACA CCGGTTGAGA CACCTGTTGA ACCACCAGTT GAGACACCAG TTGAGACACC AGTTGAGACA CCAGTTGAGA CACCTATCGA TACACCTATC GACACACCTA TCGACATACC TATTGAAACG CCCATTGAAA CGCCCATTGA TCCAGGCGAT GAATGCACTC CCACTAGCAC AACCTACTTT TTCACAATGT TTACTGAAAT CATTACCTAC TGCAATGCCT GTAATGAACC GGGCTGCGAA CTAGTGTGCG TAACAGAAAC ATTCATGCCA TCCGGAGTGT GGTTATCCCT TCTTTATGAT AGTGACTGTA CTATTGATAC TAGCGAGCCT ACTGGTCCTA TTGATTCTAT TGACAATAGT TGTTCCATTG TTACTAAAAT CTTGACACCA TCCGATATAG CTATCCCGAC AGGTTGCGAA CCAGTAGTAG AATGTGAAAC AACAGTTGAA CTTGTAGGAT ATGAGTCTGT GGTTGAAGAT GGAAGTACAA TTTTTGGGGA CATTCCAAGT ACTATTACAA AGTGTGTTAC TGCAGTTCCA GATTGCGTAA TTGAGAGCTT AATTACTATC ACTACCCAAG TTTGTCTTCC AGAAATTCCA CTTCCCGAGG GATGTAGTAG TGTAACGATT ACAACAACCT CAACTATAGA TGTACCTACA ATTTGTCCTA CTGAAAGTGA AATTTGCGAG GAAACAACAT ATGTGACTAT CTTTTCTCCA AGTGGTGCAG TATTTATTAT GGAACCTCTT CCAACCACCG TTACAACTAG TCTTTGTCAT TTCGCTTCAT GTCCTACACC AGGGGTATCT ACTGTCACTT ATACTACAGT GGTTCAGGAA TGTGATGGCG AGATTGTAGA CCCTACCAAA CCTAACAACC CTAATGATCC AAAGAACCCT AACGATCCAA AGAACCCTAA CGATCCAAAG AACCCTAACG ATCCAAAGAA TCCTAATGAT CCAAAGAATC CTAATGATCC AAAGAACCCT ACCAATCCAA AGACTCCAGA CCCCAAGAGC CCAAGCTCAA GTACGTCAGA TAAACCAAGG GGCACTCCAG GAGTTGAAGA TGACGACAAC CAAGACGAAG GCACTGGTTC ATCTCTTCAT TATTTCTCGG GAGCTGCAGT TTTAGTAGTT ACATCAATTC TTCTCTTTCT TTGA
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Protein sequence | MKLVIYFTAI ATLITAALAY ETASKFFHVV ARDENGRLVQ IGFEGELVAG SESDNPIYFS LDSNGILKFD DFIVARKGGR LIGTNRKELR NAEWGLVNGN QLSFNGKRTF HICSDQQNIV SKKGYLSLSS GVGCSSVVLE AVFGKSYLQD NRWKKRAESD TLTETSPPFP VPNPSDEAPV ETPVETPVEP PVETPVETPI DTPVETPVEP PVDTPVDTPV ETPVETPIDT PVETPVEPPV ETPVETPVET PVETPIDTPI DTPIDIPIET PIETPIDPGD ECTPTSTTYF FTMFTEIITY CNACNEPGCE LVCVTETFMP SGVWLSLLYD SDCTIDTSEP TGPIDSIDNS CSIVTKILTP SDIAIPTGCE PVVECETTVE LVGYESVVED GSTIFGDIPS TITKCVTAVP DCVIESLITI TTQVCLPEIP LPEGCSSVTI TTTSTIDVPT ICPTESEICE ETTYVTIFSP SGAVFIMEPL PTTVTTSLCH FASCPTPGVS TVTYTTVVQE CDGEIVDPTK PNNPNDPKNP NDPKNPNDPK NPNDPKNPND PKNPNDPKNP TNPKTPDPKS PSSSTSDKPR GTPGVEDDDN QDEGTGSSLH YFSGAAVLVV TSILLFL
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