| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30177 |
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| Symbol | JEN11 |
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| ID | 4837334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2149727 |
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| End bp | 2151289 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388649 |
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| Product | carboxylic acid transporter protein |
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| Protein accession | XP_001383177 |
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| Protein GI | 150864388 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0149724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0565304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGA AACTGAATGA TCTAATGTAC CTCAACTCCA AACCCTCCGA CTACCAGGTG
GAGCGTGTGG ACGATGAAAT CGAACAGGTA GCTAGAGAGA TCTTCAATGA AAAGCCAGAC
TTGTCTTGGC CAACCATTAA GAAGTATGCT TCAACTAGAC TCTCTACTTT GTTTGACTTG
CCAATCCACC ACACCGACAA AAAGTGGTAC CAACTTGTCA ATCCCGTACC TGCTTTGAAA
TCGATGTCAA AACTGGACTA TAACTTCTAC TTCTTGGGTT TCTTTGCCTG GACAGTAGAC
TCAATGGATT TCTTCTGTGT TTCTGTCACT GCTCCCTATA TTGCTGCTAC TTTGAATGTT
AACACTACCC AGATAACTTG GGGTTTAACT TTGGTGTTAA TGTTCAGATC TGTTGGTGCT
TTTATTTTTG GTTTATTGGC AGATTACTAC GGTAGAAAAT GGCCATACAT CATTATTTGT
CTCTTGTTTA TTATTGTCGA AGTCGGTACT GGTTTTGTTC AAACTTACGC TCAATTCTTA
GGCGTTCGTG CTCTATTTGG TATATTAATG GGTGCCATGT ACCCAGTTGC CAGTGTTACA
GCTTTGGAAA ATCAACCTAA ACGTGCACAA TCTGTCCTTT CCGGTCTTTT CTTGCCTGGC
TACTCGTTGG GTTACATTTT TGCAATGGTC TTTTTCAGAG CTTTCCAAGG CACCTACAGA
GAAGGTGAAG GCTGGAGATC ACTTTTCTGG TTCAGCGCTG GTCTTCCTCT TATTTTGATT
GTATGGAGAT TGCCCTTCCC TGAATCTGCC GTTTACCTCA AGATCAAGGA ATCGAAGAAG
AGAATGAATG GTGACATTGA GAAGACAGGA TTTTCCAAGG TTTTTGACAA GAGTGCCTTG
ATGACTATCA AAACCGAATG GTTGATGTTT ATCTACCTTG TTCTTCTCTT GACTGGTTTC
AACTTCACTA CTCATGGCTC TCAAGATTTG TACGTTACTC TTCTTACCAA ACAGTACAAT
GTTGATTCTG ACTACAGAAC TGTCATTGTC GTTGTTAGCA ACCTTGCAGG TATTGTCGGT
GGTGTCGTTG TTGGTTCTTT CAGTGAAGTC TTCGGCAGAA GACTTTCTAT CATAATCTGT
ATGATCTGGT GTGGTGCTTT CCTTTACCCA GCATTCATGC ACGCTAAACT GCAATGGTGG
GCATATGCTA TGTTGAATGC CGGTGTGATG GGTGCTTGGG GTATTGCCCC TATACATCTT
CTTGAGTTGG TCAATGCCAC TCACAGAGCT TTCTTGTCTG GTCTTGTCTA CCAATTGGGT
AACCTTGCGT CGTCTGCTGC TTCTACCATC GAGGCCAGAT TAGGTGAACG ATTCCCCCTT
GGAGATGGCA TTTATGACTA CGGTAAGGTT GTGTGTATTT TCTGCGGTGC TGTTTTTGCT
TACATGATTT TCATTACTAT TGTTGGTCCA GAAAGATTCC ACAGAGACTT GGAAGTTCAT
TACCTCGATG AAGTTCCTGA AGAAGGTTCT AGTAGTGATA TGCTGCTGAC CAACAAGGCT
TGA
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| Protein sequence | MDAKSNDLMY LNSKPSDYQV ERVDDEIEQV AREIFNEKPD LSWPTIKKYA STRLSTLFDL
PIHHTDKKWY QLVNPVPALK SMSKSDYNFY FLGFFAWTVD SMDFFCVSVT APYIAATLNV
NTTQITWGLT LVLMFRSVGA FIFGLLADYY GRKWPYIIIC LLFIIVEVGT GFVQTYAQFL
GVRALFGILM GAMYPVASVT ALENQPKRAQ SVLSGLFLPG YSLGYIFAMV FFRAFQGTYR
EGEGWRSLFW FSAGLPLILI VWRLPFPESA VYLKIKESKK RMNGDIEKTG FSKVFDKSAL
MTIKTEWLMF IYLVLLLTGF NFTTHGSQDL YVTLLTKQYN VDSDYRTVIV VVSNLAGIVG
GVVVGSFSEV FGRRLSIIIC MIWCGAFLYP AFMHAKSQWW AYAMLNAGVM GAWGIAPIHL
LELVNATHRA FLSGLVYQLG NLASSAASTI EARLGERFPL GDGIYDYGKV VCIFCGAVFA
YMIFITIVGP ERFHRDLEVH YLDEVPEEGS SSDMSSTNKA
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