Gene PICST_30157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30157 
SymbolISW2 
ID4837515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2094537 
End bp2098205 
Gene Length3669 bp 
Protein Length1222 aa 
Translation table12 
GC content40% 
IMG OID640388830 
Productchromatin remodeling complex Adenosinetriphosphatase 
Protein accessionXP_001383167 
Protein GI150864381 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.986183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAA GAAGTGCCCG CCAGAAAGAA AAACAGGTTG CAATAGCCAC TACTGTGGGC 
CAAAGAGCAC TGAGAAGATC TGCTCGTACC ACCACAAAAG CAGCCATAGT GGAAACTTAT
GTCAGTGACA ACGACGATGA CGAAGAATAC AACGACGCTG AAGAAGAAAA CCAGAAATCT
AAACGTACCA CCAGGTCTAG TGGAAGAACT CCAGTAAAGG AATCCAGAAC ACGAAACTCT
AGAGCAATCC GTAAACTCAG TGATAGTGAA GAAGAAGACA CTGAGGAGAC TGAAGAGAGC
GAAGAAGAAC ACGACGCAGA GGAAAACGGC AAGAGTGAGG ATGCAGAAGT TGTAGAAGAA
ATAGAGGAAG TTGTAGAAAA CGGAAAAGAT GATGACGTTG ACGATGAAGT TGACGATGAA
GTTGACGTTG AGGCAGATAA AGTAAAGCCT TCTCGACTGA AGAATAATAT AAATCCGAAG
TCTGCTCGTC GTAATAGTTC CATTTCTCAA CTCAATGATG AAACCTATGA AGAAAGAAGA
AGACGATTCG TGCTAGACAC CGACCCCAAG ATCGCCAAAG AAAATGACGT GGATGATTCA
ACCAAGAGAT TCAAGCATTT GCTTGGATTG ACACCTCTTT TCCGTTATTT CATAGACTTG
AACGCTTCCA AAGATGCTCG GTTCAAGAAG AGAATAAGAG AGGTGGACTC CAAGATGGAT
TTCCAGTTGC CCAAGAAGAA TGCCAAGATC AACAGAAGAA GACGTAAAAC CGAAAAAGAA
GAAGATGCCG AATTGTTGCA AGACGAAGAA CACCAAGATG ATGAAGACCA TCAGACTACT
GTGATAACAG AATCTCCATC TTTCGTTAAG GAAGGTAAGC TTCGTGAATA TCAAGTACAA
GGTTTGAATT GGTTGATTTC ATTGTTTGAA AACAGATTAA GTGGTATTCT TGCTGATGAA
ATGGGTCTAG GAAAGACCTT GCAAACTATT TCATTCCTTG GTTATCTCAG ATATATTAAG
AAGATTGATG GTCCATTCAT TGTCATAGTT CCAAAGTCTA CCTTGGATAA CTGGAGAAGA
GAGTTTGCCA AATGGACACC AGATGTCAAT GTCGTAGTTC TTCAAGGAAC AAAAGATGCC
CGTCATGAGA TTATCCAGAA CAAGCTATTG ACGGCTGATT TCGATGTCCT TATTACTTCC
TTCGAAATGG TTATCAGAGA GAAGTCGCAT TTGAAAAAGT TCAGATGGGA GTACATTGTC
GTCGATGAAG CACACAGAAT CAAGAATGAA GACAGTTCGC TTTCGCAGAT TATCAGAGTC
TTTTATTCTA AGAACAGATT ATTGATCACT GGTACACCTT TGCAAAACAA TTTACATGAA
CTTTGGGCTC TTTTGAATTT CCTTTTACCA GATGTGTTCG GTGATTCTGA AGTGTTTGAC
GAATGGTTTG AAAATCAGGG TGGTGAAGAT GTAGATGAAG ATACAAGGCA AAAGAATCAG
GATAAGGTAG TTCAGCAGTT GCACCAGTTG TTGAGTCCCT TCCTCTTAAG GAGAGTTAAA
GCTGATGTAG AAACTTCCTT GTTACCAAAA ATTGAAACAA ACGTATATAT TGGAATGACC
GAAATGCAAA TCCAGTGGTA CAAGAAGTTG TTGGAAAAGG ATATCGATGC TGTCAATGGT
GTTGTTGGTA AAAGGGAAGG TAAGACAAGA TTACTCAATA TTGTAATGCA ATTGAGAAAG
TGTTGCAACC ATCCGTACTT ATTTGATGGA GCCGAACCAG GACCTCCATA TACTAATGAT
GAGCATTTGG TTTTCAACTC TGGTAAGATG GTTATATTAG ACAAGATGCT TCAAAAATTC
AAAAGCGAAG GGTCCAGGGT ATTAATCTTT TCGCAAATGT CCAGATTGTT GGATATCTTG
GAAGACTACT GCTATTTGAG GGATTATTCA TACTGTAGGA TTGACGGTTC CACTTCTCAT
GAAGACAGAA TTGAAGCTAT CGATCAATAT AATGATCCAG AATCAGACAA ATTCATCTTC
TTGTTAACTA CAAGAGCTGG TGGGTTAGGT ATTAACTTGA CAAGTGCTGA TATTGTCATC
TTATATGATT CAGATTGGAA TCCTCAAGCT GACTTGCAGG CAATGGATAG AGCTCACAGA
ATCGGACAAA AGAAACAGGT CAAGGTTTAT CGATTTGTCA CTGAAAATGC CATCGAGGAA
AAAGTTTTAG ATAGAGCTGC ACAAAAGTTA AGGTTGGATC AATTGGTCAT CCAACAAGGC
AGGCAAATGA ATGCTAACAA TACTATTGGA AACTCTAAGG ATGATTTGAT TGGAATGATC
CAGCATGGTG CAAAGAAGGT GTTCGAATCT CAAAAGGGAC AATCATCAAT GCTTGACGAC
GATATTGAAC TCATTTTGCA GAAAGGTGCT GAGAAAACTG CCAATCTCAA TGCCAAATTT
GACAAATTGG GCCTTGACGA TCTTCAGAAT TTCACTTCAG ACTCTTCAGC TTACGAATGG
AATGGTCAAA ATTTTGCAAA GAAGGACAAT GCTGGAGGTC TAGGCTTCTC CTGGATCAAC
CCTTCGAAGA GAGAAAGAAA AGAGCAAACT TATTCTGTGG ATAATTATTA TAAGGACGTT
CTCAAAGCTC CTCCGTCTGT CAAGAGTGCA TCGAAAGCTG CCCAAGCAAA GCCCAGAGCA
CCAAAAAATT ATATACAACA CGATCATCAC TTCTTCCCAG AGGGTTTGGC TGAATTGTTA
GAAAGAGAGC AGTTGGCCTA TAAGAAGCTA ACAGGATTCA CGTATTCTGC GGAGGACTTT
GGTGATAGTG ATGAAGAATT CTTGGCTGAT GAATACAAAG GGGAACTTTC CAGGGAAGAA
AAGCGAGAAA GAGAACAAAA GAAAATTGAT GAAGCGGAAG CATTAACTGA AGAAGAGAAT
GAATTGAAGA ACAAATTGCT TGAAGAAAGT TTCCATTCCT GGACCAGAAG AGATTTTACA
AACTTCATCC ATGCATCTGC GAAGTATGGC AGAAACTCCT ATGCAAAGAT CAGCAAGGCA
TTAGGAAACA AGTCAGTGGA AGAAGTGGAA AGTTATCTGA AGAAATTCTG GTCTTCCTAC
CAGCAAATTG AAAGCTATGA TAAATACATC TCTCAAATTG AATCAAGTGA GAGAAAGATA
GCAAAATTGG TAAACCAGCA AAAGCTACTT GCAGCCAAAA TGGAATTATT AGAAGACCCG
ATTGAAGAAT TAAGAATCCA ATATCCACCT AACAACTCTA AAAGAGTATA CTCAAAGGCT
GAAGACAGAT TCCTTTTATG TTGTGTTCAC AAATATGGTC TTTTCAGCGA GAATTTACTT
GAGAAGATAA AAGAAGAGAT AGCAGCTTGT GATTTGTTCA GATTCGATTG GTACATACTC
TCTCGAACTC CACAGGAAAT TGGTAGAAGA ATCAACACCT TACTTCTAGC CATTTCTAGA
GAACTGGATG GTCCTCTTCA TAATAAGAGG AAGCCAGGCA AACAAGTGAG TTCCAATGCT
AGTTCCAGAC TAGGTTCAGT TGAACCAACT GTGAATGGTG GAACTTCGAA TGGTGGAGTT
ACAAAGAGAG GAAGCTCTGA CATGAAATCA TCGACCACAG ATTCACAACC CAAGAAAAAG
AAAATTTAA
 
Protein sequence
MNRRSARQKE KQVAIATTVG QRASRRSART TTKAAIVETY VSDNDDDEEY NDAEEENQKS 
KRTTRSSGRT PVKESRTRNS RAIRKLSDSE EEDTEETEES EEEHDAEENG KSEDAEVVEE
IEEVVENGKD DDVDDEVDDE VDVEADKVKP SRSKNNINPK SARRNSSISQ LNDETYEERR
RRFVLDTDPK IAKENDVDDS TKRFKHLLGL TPLFRYFIDL NASKDARFKK RIREVDSKMD
FQLPKKNAKI NRRRRKTEKE EDAELLQDEE HQDDEDHQTT VITESPSFVK EGKLREYQVQ
GLNWLISLFE NRLSGILADE MGLGKTLQTI SFLGYLRYIK KIDGPFIVIV PKSTLDNWRR
EFAKWTPDVN VVVLQGTKDA RHEIIQNKLL TADFDVLITS FEMVIREKSH LKKFRWEYIV
VDEAHRIKNE DSSLSQIIRV FYSKNRLLIT GTPLQNNLHE LWALLNFLLP DVFGDSEVFD
EWFENQGGED VDEDTRQKNQ DKVVQQLHQL LSPFLLRRVK ADVETSLLPK IETNVYIGMT
EMQIQWYKKL LEKDIDAVNG VVGKREGKTR LLNIVMQLRK CCNHPYLFDG AEPGPPYTND
EHLVFNSGKM VILDKMLQKF KSEGSRVLIF SQMSRLLDIL EDYCYLRDYS YCRIDGSTSH
EDRIEAIDQY NDPESDKFIF LLTTRAGGLG INLTSADIVI LYDSDWNPQA DLQAMDRAHR
IGQKKQVKVY RFVTENAIEE KVLDRAAQKL RLDQLVIQQG RQMNANNTIG NSKDDLIGMI
QHGAKKVFES QKGQSSMLDD DIELILQKGA EKTANLNAKF DKLGLDDLQN FTSDSSAYEW
NGQNFAKKDN AGGLGFSWIN PSKRERKEQT YSVDNYYKDV LKAPPSVKSA SKAAQAKPRA
PKNYIQHDHH FFPEGLAELL EREQLAYKKL TGFTYSAEDF GDSDEEFLAD EYKGELSREE
KREREQKKID EAEALTEEEN ELKNKLLEES FHSWTRRDFT NFIHASAKYG RNSYAKISKA
LGNKSVEEVE SYSKKFWSSY QQIESYDKYI SQIESSERKI AKLVNQQKLL AAKMELLEDP
IEELRIQYPP NNSKRVYSKA EDRFLLCCVH KYGLFSENLL EKIKEEIAAC DLFRFDWYIL
SRTPQEIGRR INTLLLAISR ESDGPLHNKR KPGKQVSSNA SSRLGSVEPT VNGGTSNGGV
TKRGSSDMKS STTDSQPKKK KI