Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30157 |
Symbol | ISW2 |
ID | 4837515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 2094537 |
End bp | 2098205 |
Gene Length | 3669 bp |
Protein Length | 1222 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640388830 |
Product | chromatin remodeling complex Adenosinetriphosphatase |
Protein accession | XP_001383167 |
Protein GI | 150864381 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.986183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGAA GAAGTGCCCG CCAGAAAGAA AAACAGGTTG CAATAGCCAC TACTGTGGGC CAAAGAGCAC TGAGAAGATC TGCTCGTACC ACCACAAAAG CAGCCATAGT GGAAACTTAT GTCAGTGACA ACGACGATGA CGAAGAATAC AACGACGCTG AAGAAGAAAA CCAGAAATCT AAACGTACCA CCAGGTCTAG TGGAAGAACT CCAGTAAAGG AATCCAGAAC ACGAAACTCT AGAGCAATCC GTAAACTCAG TGATAGTGAA GAAGAAGACA CTGAGGAGAC TGAAGAGAGC GAAGAAGAAC ACGACGCAGA GGAAAACGGC AAGAGTGAGG ATGCAGAAGT TGTAGAAGAA ATAGAGGAAG TTGTAGAAAA CGGAAAAGAT GATGACGTTG ACGATGAAGT TGACGATGAA GTTGACGTTG AGGCAGATAA AGTAAAGCCT TCTCGACTGA AGAATAATAT AAATCCGAAG TCTGCTCGTC GTAATAGTTC CATTTCTCAA CTCAATGATG AAACCTATGA AGAAAGAAGA AGACGATTCG TGCTAGACAC CGACCCCAAG ATCGCCAAAG AAAATGACGT GGATGATTCA ACCAAGAGAT TCAAGCATTT GCTTGGATTG ACACCTCTTT TCCGTTATTT CATAGACTTG AACGCTTCCA AAGATGCTCG GTTCAAGAAG AGAATAAGAG AGGTGGACTC CAAGATGGAT TTCCAGTTGC CCAAGAAGAA TGCCAAGATC AACAGAAGAA GACGTAAAAC CGAAAAAGAA GAAGATGCCG AATTGTTGCA AGACGAAGAA CACCAAGATG ATGAAGACCA TCAGACTACT GTGATAACAG AATCTCCATC TTTCGTTAAG GAAGGTAAGC TTCGTGAATA TCAAGTACAA GGTTTGAATT GGTTGATTTC ATTGTTTGAA AACAGATTAA GTGGTATTCT TGCTGATGAA ATGGGTCTAG GAAAGACCTT GCAAACTATT TCATTCCTTG GTTATCTCAG ATATATTAAG AAGATTGATG GTCCATTCAT TGTCATAGTT CCAAAGTCTA CCTTGGATAA CTGGAGAAGA GAGTTTGCCA AATGGACACC AGATGTCAAT GTCGTAGTTC TTCAAGGAAC AAAAGATGCC CGTCATGAGA TTATCCAGAA CAAGCTATTG ACGGCTGATT TCGATGTCCT TATTACTTCC TTCGAAATGG TTATCAGAGA GAAGTCGCAT TTGAAAAAGT TCAGATGGGA GTACATTGTC GTCGATGAAG CACACAGAAT CAAGAATGAA GACAGTTCGC TTTCGCAGAT TATCAGAGTC TTTTATTCTA AGAACAGATT ATTGATCACT GGTACACCTT TGCAAAACAA TTTACATGAA CTTTGGGCTC TTTTGAATTT CCTTTTACCA GATGTGTTCG GTGATTCTGA AGTGTTTGAC GAATGGTTTG AAAATCAGGG TGGTGAAGAT GTAGATGAAG ATACAAGGCA AAAGAATCAG GATAAGGTAG TTCAGCAGTT GCACCAGTTG TTGAGTCCCT TCCTCTTAAG GAGAGTTAAA GCTGATGTAG AAACTTCCTT GTTACCAAAA ATTGAAACAA ACGTATATAT TGGAATGACC GAAATGCAAA TCCAGTGGTA CAAGAAGTTG TTGGAAAAGG ATATCGATGC TGTCAATGGT GTTGTTGGTA AAAGGGAAGG TAAGACAAGA TTACTCAATA TTGTAATGCA ATTGAGAAAG TGTTGCAACC ATCCGTACTT ATTTGATGGA GCCGAACCAG GACCTCCATA TACTAATGAT GAGCATTTGG TTTTCAACTC TGGTAAGATG GTTATATTAG ACAAGATGCT TCAAAAATTC AAAAGCGAAG GGTCCAGGGT ATTAATCTTT TCGCAAATGT CCAGATTGTT GGATATCTTG GAAGACTACT GCTATTTGAG GGATTATTCA TACTGTAGGA TTGACGGTTC CACTTCTCAT GAAGACAGAA TTGAAGCTAT CGATCAATAT AATGATCCAG AATCAGACAA ATTCATCTTC TTGTTAACTA CAAGAGCTGG TGGGTTAGGT ATTAACTTGA CAAGTGCTGA TATTGTCATC TTATATGATT CAGATTGGAA TCCTCAAGCT GACTTGCAGG CAATGGATAG AGCTCACAGA ATCGGACAAA AGAAACAGGT CAAGGTTTAT CGATTTGTCA CTGAAAATGC CATCGAGGAA AAAGTTTTAG ATAGAGCTGC ACAAAAGTTA AGGTTGGATC AATTGGTCAT CCAACAAGGC AGGCAAATGA ATGCTAACAA TACTATTGGA AACTCTAAGG ATGATTTGAT TGGAATGATC CAGCATGGTG CAAAGAAGGT GTTCGAATCT CAAAAGGGAC AATCATCAAT GCTTGACGAC GATATTGAAC TCATTTTGCA GAAAGGTGCT GAGAAAACTG CCAATCTCAA TGCCAAATTT GACAAATTGG GCCTTGACGA TCTTCAGAAT TTCACTTCAG ACTCTTCAGC TTACGAATGG AATGGTCAAA ATTTTGCAAA GAAGGACAAT GCTGGAGGTC TAGGCTTCTC CTGGATCAAC CCTTCGAAGA GAGAAAGAAA AGAGCAAACT TATTCTGTGG ATAATTATTA TAAGGACGTT CTCAAAGCTC CTCCGTCTGT CAAGAGTGCA TCGAAAGCTG CCCAAGCAAA GCCCAGAGCA CCAAAAAATT ATATACAACA CGATCATCAC TTCTTCCCAG AGGGTTTGGC TGAATTGTTA GAAAGAGAGC AGTTGGCCTA TAAGAAGCTA ACAGGATTCA CGTATTCTGC GGAGGACTTT GGTGATAGTG ATGAAGAATT CTTGGCTGAT GAATACAAAG GGGAACTTTC CAGGGAAGAA AAGCGAGAAA GAGAACAAAA GAAAATTGAT GAAGCGGAAG CATTAACTGA AGAAGAGAAT GAATTGAAGA ACAAATTGCT TGAAGAAAGT TTCCATTCCT GGACCAGAAG AGATTTTACA AACTTCATCC ATGCATCTGC GAAGTATGGC AGAAACTCCT ATGCAAAGAT CAGCAAGGCA TTAGGAAACA AGTCAGTGGA AGAAGTGGAA AGTTATCTGA AGAAATTCTG GTCTTCCTAC CAGCAAATTG AAAGCTATGA TAAATACATC TCTCAAATTG AATCAAGTGA GAGAAAGATA GCAAAATTGG TAAACCAGCA AAAGCTACTT GCAGCCAAAA TGGAATTATT AGAAGACCCG ATTGAAGAAT TAAGAATCCA ATATCCACCT AACAACTCTA AAAGAGTATA CTCAAAGGCT GAAGACAGAT TCCTTTTATG TTGTGTTCAC AAATATGGTC TTTTCAGCGA GAATTTACTT GAGAAGATAA AAGAAGAGAT AGCAGCTTGT GATTTGTTCA GATTCGATTG GTACATACTC TCTCGAACTC CACAGGAAAT TGGTAGAAGA ATCAACACCT TACTTCTAGC CATTTCTAGA GAACTGGATG GTCCTCTTCA TAATAAGAGG AAGCCAGGCA AACAAGTGAG TTCCAATGCT AGTTCCAGAC TAGGTTCAGT TGAACCAACT GTGAATGGTG GAACTTCGAA TGGTGGAGTT ACAAAGAGAG GAAGCTCTGA CATGAAATCA TCGACCACAG ATTCACAACC CAAGAAAAAG AAAATTTAA
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Protein sequence | MNRRSARQKE KQVAIATTVG QRASRRSART TTKAAIVETY VSDNDDDEEY NDAEEENQKS KRTTRSSGRT PVKESRTRNS RAIRKLSDSE EEDTEETEES EEEHDAEENG KSEDAEVVEE IEEVVENGKD DDVDDEVDDE VDVEADKVKP SRSKNNINPK SARRNSSISQ LNDETYEERR RRFVLDTDPK IAKENDVDDS TKRFKHLLGL TPLFRYFIDL NASKDARFKK RIREVDSKMD FQLPKKNAKI NRRRRKTEKE EDAELLQDEE HQDDEDHQTT VITESPSFVK EGKLREYQVQ GLNWLISLFE NRLSGILADE MGLGKTLQTI SFLGYLRYIK KIDGPFIVIV PKSTLDNWRR EFAKWTPDVN VVVLQGTKDA RHEIIQNKLL TADFDVLITS FEMVIREKSH LKKFRWEYIV VDEAHRIKNE DSSLSQIIRV FYSKNRLLIT GTPLQNNLHE LWALLNFLLP DVFGDSEVFD EWFENQGGED VDEDTRQKNQ DKVVQQLHQL LSPFLLRRVK ADVETSLLPK IETNVYIGMT EMQIQWYKKL LEKDIDAVNG VVGKREGKTR LLNIVMQLRK CCNHPYLFDG AEPGPPYTND EHLVFNSGKM VILDKMLQKF KSEGSRVLIF SQMSRLLDIL EDYCYLRDYS YCRIDGSTSH EDRIEAIDQY NDPESDKFIF LLTTRAGGLG INLTSADIVI LYDSDWNPQA DLQAMDRAHR IGQKKQVKVY RFVTENAIEE KVLDRAAQKL RLDQLVIQQG RQMNANNTIG NSKDDLIGMI QHGAKKVFES QKGQSSMLDD DIELILQKGA EKTANLNAKF DKLGLDDLQN FTSDSSAYEW NGQNFAKKDN AGGLGFSWIN PSKRERKEQT YSVDNYYKDV LKAPPSVKSA SKAAQAKPRA PKNYIQHDHH FFPEGLAELL EREQLAYKKL TGFTYSAEDF GDSDEEFLAD EYKGELSREE KREREQKKID EAEALTEEEN ELKNKLLEES FHSWTRRDFT NFIHASAKYG RNSYAKISKA LGNKSVEEVE SYSKKFWSSY QQIESYDKYI SQIESSERKI AKLVNQQKLL AAKMELLEDP IEELRIQYPP NNSKRVYSKA EDRFLLCCVH KYGLFSENLL EKIKEEIAAC DLFRFDWYIL SRTPQEIGRR INTLLLAISR ESDGPLHNKR KPGKQVSSNA SSRLGSVEPT VNGGTSNGGV TKRGSSDMKS STTDSQPKKK KI
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