Gene PICST_29946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29946 
Symbol 
ID4836826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1567548 
End bp1567919 
Gene Length372 bp 
Protein Length123 aa 
Translation table12 
GC content51% 
IMG OID640388141 
Productpredicted protein 
Protein accessionXP_001382521 
Protein GI126131992 
COG category[S] Function unknown 
COG ID[COG4357] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.781673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGA AGGTGATTGC AACGGAGCAG ATCGTCGGAG ACGGGGTGTG TCTTCGGGGC 
CAGCTTGTGG ACGAAGCTAC CAGATGTAGC CACTACTATT CTGACGTAGA TGTGATAGCC
ATCAAGTTCA GATGTTGTCG CACATATTAT CCTTGCTACA AATGTCACGA GGAGTTGGCC
GGGCATGAGA TCCAGCGGTG GGCCCGGGCA GAGTTGGAGG AAGCCAAAAC TCCCGTGATA
CTCTGTGGAC AATGTCACCG GGAATGGAAC TTTATGGAGT ACGCTGCCAG CCCCGAGATG
AAATGCCAGC ATTGCGGAGT TCAATTCAAC CCCAAATGCA GCCTCCACTA CGATATCTAT
TTCGATATAT AG
 
Protein sequence
MTEKVIATEQ IVGDGVCLRG QLVDEATRCS HYYSDVDVIA IKFRCCRTYY PCYKCHEELA 
GHEIQRWARA ELEEAKTPVI LCGQCHREWN FMEYAASPEM KCQHCGVQFN PKCSLHYDIY
FDI