| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29898 |
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| Symbol | RVB2 |
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| ID | 4837476 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1454719 |
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| End bp | 1456269 |
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| Gene Length | 1551 bp |
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| Protein Length | 484 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388791 |
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| Product | transcriptional regulator |
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| Protein accession | XP_001383047 |
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| Protein GI | 126133044 |
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| COG category | [K] Transcription |
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| COG ID | [COG1224] DNA helicase TIP49, TBP-interacting protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.287738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.530711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACGTT TTTGTATCTA TGCTTGTGAA ACCACGAGTA TATGATGAAA TGCTCTGCGG
ACTTTGAGTT CTGAATGGCT ACTAACTTTT TATTTATAGG CATCTACACC TACGATCACA
ACCAAAGTCC AGACAAAGGA CTTGTCTGGG TTATCTCTTA TAGCTGCCCA CTCCCACATT
TCGGGTCTAG GCTTGGACGA GAACTTGAAG CCAAAAGAAT CAGCTGAAGG GATGGTTGGA
CAATTGAAAG CCAGAAAGGC GGCTGGCGTG ATTTTAAAGA TGATTCAGGC TGGTAAGATT
GCTGGCCGTG CTGTGCTTAT TGCCGGGCCT CCATCTACTG GTAAGACTGC CATTGCTATG
GGTTTGTCGC AGAGCTTAGG TACAGATGTT CCATTTACAG CAATAGCCGG TTCTGAAGTC
TTTTCTTTAG AATTATCCAA GACTGAATCA TTGATACAAG CTTTCCGTAA ATCTATTGGT
ATCAAGATCA AAGAAGAAAC AGAAATAATC GAAGGTGAAG TCGTCGAGAT CCAAATCGAC
AGATCAATTA CCGGCGGTCA CAAGCAGGGA AAGTTGACCA TTAAGACGGC TGATATGGAG
ACAATTTATG AGTTGGGTAA CAAGATGATT GAAGGCTTAA CTAAGGAAAA GGTATTGGCT
GGAGATGTTA TTTCCATCGA CAAAGCTAGT GGTAAAATCA CCAAGTTAGG TAAATCATTC
ACCAGGGCCA GAGACTACGA TGCTATGGGT CCAGAAACCA AGTTTGTCCA ATGTCCCGAA
GGTGAGTTGC AGAAGAGAAA AGAAGTTGTC CATACTGTTT CGTTGCACGA GATAGACGTT
ATAAATTCTA GACAACAGGG GTTCCTTGCC TTGTTCTCGG GTGACACTGG TGAGATCCGC
TCTGAGGTTC GTGACCAAAT CAACACCAAA GTCGCCGAAT GGAAGGAAGA AGGTAAGGCC
GAGATCGTGC CTGGTGTCTT ATTCATTGAT GAGGTTCACA TGTTGGATAT TGAGTGCTTT
TCATTCATCA ATAGAGCATT GGAGGACGAC TTTGCACCCA TTGTTATCAT GGCCACTAAC
CGAGGAATCA CCAGGACTCG TGGTACTAAC TACAAGTCCC CTCATGGCTT ACCTGTAGAT
TTGTTGGACA GATCTATCAT CATCCACACT TCATCATACA GTGCCGACGA GATCAGAACC
ATTCTTTCCA TAAGAGCCAA CGAAGAAGAA GTAGAATTGA CCCCTGATGC TTTGGCATTG
TTGACCAAGA TTGGTCAAGA AACAAGCTTG AGATACGCCT CTAACTTGAT TTCAGTTTCC
CAACAGATTG CATTGAAGAG AAGAAGCACT TCTGTTGAGC TTCCAGATAT CAAGAGAGCA
TACATGTTGT TTTTGGATGC TGACAGATCG GTACAATACT TGGAAGAGTT CCCAAACCAA
TTCATCGACA ATTCTGGTAA TGTTACAATT GGCCAGAAGG ATGAGTCTTC GGCCAATGGC
AACGGCGCTA CTCCTATTGT TGTAGATGAA GACAAGATGG AGACCGATTA G
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| Protein sequence | MASTPTITTK VQTKDLSGLS LIAAHSHISG LGLDENLKPK ESAEGMVGQL KARKAAGVIL
KMIQAGKIAG RAVLIAGPPS TGKTAIAMGL SQSLGTDVPF TAIAGSEVFS LELSKTESLI
QAFRKSIGIK IKEETEIIEG EVVEIQIDRS ITGGHKQGKL TIKTADMETI YELGNKMIEG
LTKEKVLAGD VISIDKASGK ITKLGKSFTR ARDYDAMGPE TKFVQCPEGE LQKRKEVVHT
VSLHEIDVIN SRQQGFLALF SGDTGEIRSE VRDQINTKVA EWKEEGKAEI VPGVLFIDEV
HMLDIECFSF INRALEDDFA PIVIMATNRG ITRTRGTNYK SPHGLPVDLL DRSIIIHTSS
YSADEIRTIL SIRANEEEVE LTPDALALLT KIGQETSLRY ASNLISVSQQ IALKRRSTSV
ELPDIKRAYM LFLDADRSVQ YLEEFPNQFI DNSGNVTIGQ KDESSANGNG ATPIVVDEDK
METD
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