| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29824 |
|---|
| Symbol | ARP9 |
|---|
| ID | 4837228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 1272125 |
|---|
| End bp | 1273504 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640388543 |
|---|
| Product | Actin-like protein ARP9 (Chromatin structure remodeling complex protein ARP9) (SWI/SNF complex component ARP9) |
|---|
| Protein accession | XP_001382464 |
|---|
| Protein GI | 126131878 |
|---|
| COG category | [Z] Cytoskeleton |
|---|
| COG ID | [COG5277] Actin and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.741431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.548816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTGT ACAAAGAAGA AAACTTCTTA GTGGTCCATC CCGGCTCTGA GCACACGTTG
TTCTCATTTG GGTTGCAAGA CTCCCTTGCT CCTCCACAAT ACAAGATTCC CTCGGTTGCT
TACCAGAATC CCACCACCAA AGAATACAAG TCCAAACGTG ACGAAAACGA CACTGATTTC
GTAGAAATCC ACCCCATACA CAACTCCAAA GTGGTGGACT TGCCTGCGTT CAACTACTTG
TTGAAGATTA TTTTGCAGAG TGTCATCACC AAAAATCCTA TTGTTACCAT CAACCAGATT
CCTTTACTTC TTATAGTGCC TTCTTTGACG TGGTCCCGGT CAGATATCGA GTGTATCACC
AAATACGTGA TTGAATCCTT GGAGTTTACA GCGTTTAATA TCCTTGACTT ATCATTGTCG
TCCACTTTCG GTGTGGGCTC ATCCACAAAT TCGGTCGTAG TAAATGTAGG TCACAACAAC
ATCCAGGTCG TGCCTGTAGT CGGTTACCAG ACCGTTAAAT TCGCAGGCAA GTACTTGACG
GGCGTAGGAG GCATCACATT GAACGAAGAA ATAAAGAAAA CTTTGCCCAA CTTCACAGAT
GCACAAGTGG AAGACTTGAA GATATCTGGC ATATACGAAG TTTTAACCGA CCACGAGAGC
TCGTTCTATT CGTTTGCCGA CTTGGAATCC AAACAAGAGG ACGATGAATT TGACGTAGCA
AAAATCGTAG CGTCTGACGA CAAAGGTGCC ATAATCAACG GTGAAGTCGA AGATGAAAAA
CCCAATAAGG AACTTGAAAG GAATTTCTTT GTCGATTCCA AATCGGGCGA GAAAATATAC
GTAGGCAAGG AAAGATTCCA AAGTGCAGCC AAGTTGGTTG AAGTGGTGAC TGATGCCATA
TACAACTCGT TGGCATTGAT ACCGGACTTT GAAAAAAGAC AAGATTGCTA CGATAACATC
ATTCTTGTAG GCTCGACATT CAAGATTCCT GGCTTGAAGG AGGCTGTGCT AGTCAGATTA
TCAGAAAAGT ATCTTATCAG TGAACCCGGT GAATCAACAG GATCTGCAAA GGACTCCAAT
GGTATCAATG TCACTCTTGC CAGGTACCAA CAGGCAGAGG ATTCTGTGGA CGGCGAGACA
AACTCCAACT TGGCTCAAGT TCCAAGTGCC ATTAAGCTTG CCAAGTATCC TGACTATTTC
CCGGAATGGA AGAAGCCTAA AGAAAGAGGT GGATCGTGGG AAGATGTTTT CTTCTTGGGA
GGAGAGATCT ATTCCAAGCA GATCTTTTCG AACAATTCCA ACCACGGCCG TGAGTTGTTT
ATTGACAGTG AGGTTTACGA AGAAAGAGGG CCTCAGAGTA TCTGGGATGT TACTATTTAG
|
|---|
| Protein sequence | MPLYKEENFL VVHPGSEHTL FSFGLQDSLA PPQYKIPSVA YQNPTTKEYK SKRDENDTDF
VEIHPIHNSK VVDLPAFNYL LKIILQSVIT KNPIVTINQI PLLLIVPSLT WSRSDIECIT
KYVIESLEFT AFNILDLSLS STFGVGSSTN SVVVNVGHNN IQVVPVVGYQ TVKFAGKYLT
GVGGITLNEE IKKTLPNFTD AQVEDLKISG IYEVLTDHES SFYSFADLES KQEDDEFDVA
KIVASDDKGA IINGEVEDEK PNKELERNFF VDSKSGEKIY VGKERFQSAA KLVEVVTDAI
YNSLALIPDF EKRQDCYDNI ILVGSTFKIP GLKEAVLVRL SEKYLISEPG ESTGSAKDSN
GINVTLARYQ QAEDSVDGET NSNLAQVPSA IKLAKYPDYF PEWKKPKERG GSWEDVFFLG
GEIYSKQIFS NNSNHGRELF IDSEVYEERG PQSIWDVTI
|
|---|
| |