Gene PICST_29775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29775 
Symbol 
ID4837219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1122328 
End bp1122912 
Gene Length585 bp 
Protein Length194 aa 
Translation table12 
GC content46% 
IMG OID640388534 
Productpredicted protein 
Protein accessionXP_001382993 
Protein GI150864252 
COG category[S] Function unknown 
COG ID[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGTT TACCTTCTAT ATCGCTATTC CCGTCTCTCT CCAAAGAAGA GAAAGTCGAA 
GTCCTAGCGC ACTTGTTCGA GAGATGTGAG ACCTTGACCG AATTAATTTT CTCCACAGTT
CTCTACGATT CCAACACTAC GTTCGCCAGC TATACCCAAT TGATAGAAGC CGTAAGAACA
GCATTACGGA AGTACCTTAC CGAGGCCGAA GAAACAGCTG AGAAAACGCA TACTGCCATC
GATTCCAAAA TCGCTAAAAT CATAGCGGCA CACCCGCGGC TTGGAGGCTC GTCCAAAGCC
AGTGCTGAGA AGTTGTCTCA ACATTCTTCA CTGGAACAGA AGTCGCTTCA GACATCATCT
GCCGAAGAAG CACTGCTCTT GGTTGTGCTC AACGACGAGT ACGAATCTGT TTTTCCTGGT
TTGCGATACG TTGTCTTTGT CAATGGCAGA TCTAGACCCG TTGTGATGGA GAATATGCTG
TCTAGGATAG CAAGAAACGA TATACAGAAG GAGAGAGAGG AGGCTTTTGA AGCCATGTGT
GATATTGCCA ACGATAGAGC AAGCAAGTTA GTTGAGAAGA TATAG
 
Protein sequence
MYRLPSISLF PSLSKEEKVE VLAHLFERCE TLTELIFSTV LYDSNTTFAS YTQLIEAVRT 
ALRKYLTEAE ETAEKTHTAI DSKIAKIIAA HPRLGGSSKA SAEKLSQHSS SEQKSLQTSS
AEEASLLVVL NDEYESVFPG LRYVVFVNGR SRPVVMENMS SRIARNDIQK EREEAFEAMC
DIANDRASKL VEKI