| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29770 |
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| Symbol | CDC53 |
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| ID | 4837353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1108636 |
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| End bp | 1110966 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388668 |
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| Product | ubiquitin ligase (cullin) of SCF involved in cell cycle control |
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| Protein accession | XP_001382990 |
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| Protein GI | 150864249 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5647] Cullin, a subunit of E3 ubiquitin ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTC CTGTAGCCAG CGACTTGAAC GCTACATGGA GTTTCATCCA ACCAGGCTTG
GAGTTCATCT TGGGTGCCCA AGGCGATCAA GGTGTTACGC CCAAGATGTA CATGAACTGT
TACACTGCTG TTTACAACTA CTGCGTTAAC AAATCACGTC ATGGGGCCAC TGCTACGTCT
ATTGCTGCTT CCTCGGACTC CAACTCTTAT TCATTGGCTG GAGCCGAGAT CTACGCTAAA
TTGGACGTAT ACTTGACTCA ATTCATCCGA GCCTTGAAGA AAGAGCCCTC GGAAACATTT
CTCGAGTTCT ATGTCCGCAA ATGGACCCGT TTCACTATCG GCGCCGGCTA CATGAATAAC
GTATTTGACT ATATGAACCG GTACTGGGTG CAGAAGGAGC GTTCCGATGG AAGACGGGAT
GTTTTTGACG TTAACACACT TTCACTCATC AAATGGAGAT CGGAGATGTT CAACAACAAC
TCTGACACGT TGATTTCCGA AGTGTTAGAT TTGATTGAAA TGCAGAGAAA CAACGAAATC
GTAGACACCT CTCTTATCTC AACTGCCATT AAGTCGCTAG TATTCTTAGG AATTGATGTT
CAGGACTTGA AGAAACCGAA CTTGGTTGTC TACATCAGTT ATTTCGAAAA GAACTTCTTG
GAAAAGACAG GCGAATACTA CAGCAGAGAA AGCTCACAGT ATCTCCAAGA GCACAACGTC
GTGGACTATA TGAAGAAATG TGAAGCCAGA TTGGCTGAAG AAATCTCTAG ATCAAATAAC
TACTTGGAAG ACCACACCAA GAAGCACTTG TTGGACATCT TGAACAAAGT CTTGATAGAG
GACCATGCCA ACGAGATGTA CAGCCAATTT CTCACTTTAT TAGAACAAAA CGAGACGGAC
CACATCCAGA GAATGTACAA GTTGTTGTAC AGACTTCCTG CAACTTTAGG ACCATTGGCT
GATACTTTGG AGCAGTACAT CAAAGAACAA GCTGACAAGG CTATTGAAAA AGTAAAACTA
GCCTCAGAGT CACAGGCTGA AGCCAAAGTT GATGGTAAGC CTACAAAGAA GTCGGCTGCT
GGAGCAGTTG ATCCCAAGTC ATATATCAAC ACTCTTATAG CCATCTATAA CCAGTACAAC
GAAGTAGTGC ACCAGGCATT CAACAAGGAT ACACGTTTCA TTAAGTCCTT GGACAATGCC
TGCCGTCATT TCATGAACAA AAACTCAATA GCTATTCCCA CACCTAAAGC TAAGTGCAAG
ACTCCAGAGC TTTTGGCTAG ATATGCTGAC AGCTTCTTGA GAGGAACCAG TAAAGAAGTG
GACACTGTGG ACATGAATCC CGAGAACTTG ATGATTGTTT TCAAGTACTT AAATGACAAA
GATGCTTTTG AAGAATACTA CCGTCGTCTG TTGGCTAAGA GATTAATCAA CGGTAACAGC
AAGTCAGAGG AGTTGGAAGA AAGTATTATC CAGAGATTGC AGGAAGAAAA CTCAATTGAG
TACACTTCCA AGATGACCAA GATGTTCTCG GACATGAAGG CTTCTGAAGA TTTGAAGGCT
AACATCAAGG ACCATGTTTC TGAGTCTATA GTCAAGGATT TCAACCCCTT GATCCTTGCC
CAGAGTATGT GGCCATTTAC ACACATGGAA GATTACGACC TTAATGTAGC ACCTGAATTG
CAGGCACCAT TTGAAAAAGT GGTAGAGATC TATGGAGCCA AGCACAACGG TAGACAGCTC
AAGTGGCTTT GGAATCATGG TAGAGCCGAA TTGAGAGCCA ATCTTTCCAA AAAAGGTAAG
GCTCCATTTG TATTCACAGT CAGTAATTTA CAAATGATGA TTTTGATAGC TTTCAACAAG
AAAAGTACAT ACACTTTCCT GGAGTTGCAC GAAATCGTGG GAGCTGCAAG ACACACGTTC
GAATCTCATT TGCTTCCATT CACGAAGTAC AAGTTGCTTG ACCAGAGTCC ACCGGGACCA
GAGAACACTG GCAATGCAGA CACCACCTTC ACCATCGTGG AAGAGTACAA GTCCAAGAAA
CTCAAGGTCA ACTTTACCAG TGTGATCAAA AACAACGAAG CTAAACAGGA AGAAGATGAC
GCCAACAAAG AGATTGACGA AACACGTAGA AACTACCTTT CAGCCTGTAT TGTGAGAATC
ATGAAGTCGC GAAAGACGGT CAAGCACAAC GAATTGATAA ACGAGGTGTT ACCGCAGACG
TTGTCGCGGT TCCATGCTAA GATTATCGAT ATTAAGAGAG TCATAGACCA GTTGATAGAG
AAGCAGTATA TCCAGCGTAT TGACAACAAT ACCTACGAAT ACTTGTCATA G
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| Protein sequence | MPFPVASDLN ATWSFIQPGL EFILGAQGDQ GVTPKMYMNC YTAVYNYCVN KSRHGATATS
IAASSDSNSY SLAGAEIYAK LDVYLTQFIR ALKKEPSETF LEFYVRKWTR FTIGAGYMNN
VFDYMNRYWV QKERSDGRRD VFDVNTLSLI KWRSEMFNNN SDTLISEVLD LIEMQRNNEI
VDTSLISTAI KSLVFLGIDV QDLKKPNLVV YISYFEKNFL EKTGEYYSRE SSQYLQEHNV
VDYMKKCEAR LAEEISRSNN YLEDHTKKHL LDILNKVLIE DHANEMYSQF LTLLEQNETD
HIQRMYKLLY RLPATLGPLA DTLEQYIKEQ ADKAIEKVKL ASESQAEAKV DGKPTKKSAA
GAVDPKSYIN TLIAIYNQYN EVVHQAFNKD TRFIKSLDNA CRHFMNKNSI AIPTPKAKCK
TPELLARYAD SFLRGTSKEV DTVDMNPENL MIVFKYLNDK DAFEEYYRRS LAKRLINGNS
KSEELEESII QRLQEENSIE YTSKMTKMFS DMKASEDLKA NIKDHVSESI VKDFNPLILA
QSMWPFTHME DYDLNVAPEL QAPFEKVVEI YGAKHNGRQL KWLWNHGRAE LRANLSKKGK
APFVFTVSNL QMMILIAFNK KSTYTFSELH EIVGAARHTF ESHLLPFTKY KLLDQSPPGP
ENTGNADTTF TIVEEYKSKK LKVNFTSVIK NNEAKQEEDD ANKEIDETRR NYLSACIVRI
MKSRKTVKHN ELINEVLPQT LSRFHAKIID IKRVIDQLIE KQYIQRIDNN TYEYLS
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