| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29730 |
|---|
| Symbol | |
|---|
| ID | 4836814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 986144 |
|---|
| End bp | 986776 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640388129 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382964 |
|---|
| Protein GI | 126132878 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.114015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC CTTTTGACGA GATCCAGGCA ATCTCCACGC TTCTTCATGG ACTAACGTCA
GGTCTTGCAG ACTCGGCCGA ACGAATCAAC AACATCCAAA CACTCACTGA GAAACTTGTA
GACAAAGAAA AGTATGAAGA ATTTATCAAA GATACGCAAG TCGACTTTCC AGATGATTTG
AATGGAAAGC CAATAGAAGA ACAAGAGGAG CTTTTGATAC GGCAGCTCGA AAAAGATAGA
TTGGATATGG TTCTAGAACT ACAAAGACAC GACTTCATAG GTGAAAAGTT GCTAGAACTT
ATCGACCAGA ATGAGGATAT CGTAGAGACT GTAAAGGAAT ATCTTCAGTC AAAAGACTCC
ATTCGAAGAG AAGAAGAGGA GTACGCCAAA AAAAGGTTCG AAAATTATGC AGAAAACATC
CTCCAACCCA CAATTGACCA GCTAGACACA AACTTGTTTG ACTTATATAC TGGTATGCAT
AAGGTCCAGG AACACTTAAA GGAGTTCACT GAAATCTCAG AGGAAACGAA CAATACCATG
GTATCGCCCC AGTATCAGTC TGATTTGAAT ATGTTGGTAT CTCGTTTGAA TGAAATGGTC
CACAAATTTG AAGAATCTGC TATAGCTAAG TAA
|
|---|
| Protein sequence | MDKPFDEIQA ISTLLHGLTS GLADSAERIN NIQTLTEKLV DKEKYEEFIK DTQVDFPDDL
NGKPIEEQEE LLIRQLEKDR LDMVLELQRH DFIGEKLLEL IDQNEDIVET VKEYLQSKDS
IRREEEEYAK KRFENYAENI LQPTIDQLDT NLFDLYTGMH KVQEHLKEFT EISEETNNTM
VSPQYQSDLN MLVSRLNEMV HKFEESAIAK
|
|---|
| |