| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29704 |
|---|
| Symbol | |
|---|
| ID | 4836934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 914089 |
|---|
| End bp | 914796 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640388249 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382415 |
|---|
| Protein GI | 150863813 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.566988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAGG TTGAGTCTAT TTTTACCCTC GGTGTCAGGT TTATTGTCAC TGTTGTGATA
CGTGGACTCG AAACAATTTT CACGATCATT GTTTTGGGGT TGTCTGCATC GCTCGTTAAC
GACTATAGTG ACTACGGCAG AGGCATCTAC GCGGTAGTTG TTTCGGTTCT TACCCTTTTG
TCGATTCTCC ATAGCTTCTT TTTACCACTC TCTTTTGAGT TCAGCTGGTA CTTCTTGCTG
ACTCTTTTGA CCCAGAGCTT GGAGTTTGTC CTCTGGTTGA TTGTGTTTTC TCTCTATGCT
GACGACTTTG GTGACTTGGA CTGCTCGTTG CTTGCAGACG AAACTCCATG TCATGTTGGT
AAGGCCGCAG TTGCCTTTTC TTTCCTTAAT TGGTTGTTGT TGATTGTGGT TTTGCTGCTC
TTGGTGGTTT TTGTTGTCGT ACCTGCTGGC TTTGCAGCTT TCCAATCAAA GGTAGAATGG
ACACCTGGAG GAATCTTCCC AGTTGTAGCT GCTAAGGAAG AAGACCCAGA AAAGGTTGTT
GCAGCTGGAG AAGGAAAAGA CGAGCCTGCT GAAATCATTG TAAATGAACA ACCAGAAAAC
ACAGAACAGA CTGAACATGT CGACATCGAT GACATAATTA GCCCTGCCCT GGCTGAGCCG
GAAACAGAAA AGGAACTGGA ACCCGTTCCC GCCCCTGCAA ATTTGTAA
|
|---|
| Protein sequence | MSKVESIFTL GVRFIVTVVI RGLETIFTII VLGLSASLVN DYSDYGRGIY AVVVSVLTLL
SILHSFFLPL SFEFSWYFLS TLLTQSLEFV LWLIVFSLYA DDFGDLDCSL LADETPCHVG
KAAVAFSFLN WLLLIVVLSL LVVFVVVPAG FAAFQSKVEW TPGGIFPVVA AKEEDPEKVV
AAGEGKDEPA EIIVNEQPEN TEQTEHVDID DIISPASAEP ETEKESEPVP APANL
|
|---|
| |