Gene PICST_29703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29703 
Symbol 
ID4837313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp911666 
End bp912313 
Gene Length648 bp 
Protein Length215 aa 
Translation table12 
GC content39% 
IMG OID640388628 
Productpredicted protein 
Protein accessionXP_001382414 
Protein GI150863812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.102312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTA ACATACAAAA AATCGTCGTG TACGCTATCC GTGGATTGCA ATTATTGTTC 
AGTATCTTGG TCCTTGGTTT GTCTGCTGGA TTTCTTAGCG ACATCGAATC TAATTTTGGT
AGAGTCTCGT ATAACTTGGT TGTTTCACTA TTCACTATTG TCTATATTGT TTTCCTCGGA
GTTTTGCTGG TCACGCTACA AAACACAACT TTGCCAATTA TTATCCTCGT AATCGAGAGT
TTATTGACTT TATTTTGGTT GATTGCCTTT GCATTGACTG CAGACACATT TGGACTGATA
GACTGCTTTT TTTTATCTGA CTGGTGTAAA ATTGGTAAAG CACTTATCCC TTTCGGATTG
TTCAATTGGT TGCTATTTGC GGCCAGCTTA ATATTGTTCG TGATTTACAC CTCTGTTCCT
TTGGGAAAAG CTCATGGGAT TTCTGGTTCG TTGACAAAAC CAACAACGTT CAGCTTTGGT
GCCATTTTCT CCAATAATAT TCCAGCTCCC GAGAGTAAAG AAGATCCAAT AGCGGAAGAA
AATATTGGCG TAAGCATCTA TACCGAGGAA CAAAGAGAGT CCTCGTTAGA GAAAGATGAG
TATCCATCAG CTGACCTTGG TGATGAAGGT ACTACCTTAA AAGACTGA
 
Protein sequence
MNANIQKIVV YAIRGLQLLF SILVLGLSAG FLSDIESNFG RVSYNLVVSL FTIVYIVFLG 
VLSVTLQNTT LPIIILVIES LLTLFWLIAF ALTADTFGSI DCFFLSDWCK IGKALIPFGL
FNWLLFAASL ILFVIYTSVP LGKAHGISGS LTKPTTFSFG AIFSNNIPAP ESKEDPIAEE
NIGVSIYTEE QRESSLEKDE YPSADLGDEG TTLKD