Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29703 |
Symbol | |
ID | 4837313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 911666 |
End bp | 912313 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640388628 |
Product | predicted protein |
Protein accession | XP_001382414 |
Protein GI | 150863812 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.102312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCTA ACATACAAAA AATCGTCGTG TACGCTATCC GTGGATTGCA ATTATTGTTC AGTATCTTGG TCCTTGGTTT GTCTGCTGGA TTTCTTAGCG ACATCGAATC TAATTTTGGT AGAGTCTCGT ATAACTTGGT TGTTTCACTA TTCACTATTG TCTATATTGT TTTCCTCGGA GTTTTGCTGG TCACGCTACA AAACACAACT TTGCCAATTA TTATCCTCGT AATCGAGAGT TTATTGACTT TATTTTGGTT GATTGCCTTT GCATTGACTG CAGACACATT TGGACTGATA GACTGCTTTT TTTTATCTGA CTGGTGTAAA ATTGGTAAAG CACTTATCCC TTTCGGATTG TTCAATTGGT TGCTATTTGC GGCCAGCTTA ATATTGTTCG TGATTTACAC CTCTGTTCCT TTGGGAAAAG CTCATGGGAT TTCTGGTTCG TTGACAAAAC CAACAACGTT CAGCTTTGGT GCCATTTTCT CCAATAATAT TCCAGCTCCC GAGAGTAAAG AAGATCCAAT AGCGGAAGAA AATATTGGCG TAAGCATCTA TACCGAGGAA CAAAGAGAGT CCTCGTTAGA GAAAGATGAG TATCCATCAG CTGACCTTGG TGATGAAGGT ACTACCTTAA AAGACTGA
|
Protein sequence | MNANIQKIVV YAIRGLQLLF SILVLGLSAG FLSDIESNFG RVSYNLVVSL FTIVYIVFLG VLSVTLQNTT LPIIILVIES LLTLFWLIAF ALTADTFGSI DCFFLSDWCK IGKALIPFGL FNWLLFAASL ILFVIYTSVP LGKAHGISGS LTKPTTFSFG AIFSNNIPAP ESKEDPIAEE NIGVSIYTEE QRESSLEKDE YPSADLGDEG TTLKD
|
| |