Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29697 |
Symbol | |
ID | 4837315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 898383 |
End bp | 899285 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388630 |
Product | predicted protein |
Protein accession | XP_001382410 |
Protein GI | 150863809 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.121562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTACGT CTATCAGCAT CCTCCAGGAG GCTGCTTCAC GGCTCTATCC TGCTATTATC ACAGAATTGT CCAGTCAATC GACAAAAAAG TACAGAAATG ATAAGCTCTC CTTCTCAGAT CTCACTGCAT GGAGAAATGA AGAATTACCC CAGAAATTGA AGCTGTTGTA TGATGACAAG AAGGAAGCTT ATCTTACAAA AGACGAGCTT AGACTTCTTC TTGACTGGAA ACTAGCCAAT GGAAAGTTTC GTCCAACGTT GCCTAAGTTA ATCGATTCCA ACGATGCGAA CGATGTAGAA TTGATTACCA AAGATGGTCT TGGTATACTT CTCGATTTCG TTGCTGATAA AGATGCAAGT TTCTGGAAAG AAGTTGATGA ACAAGATTTG CAGAATTATA CTACTGTTGT GAAGAAATCG CTCAAGAAAC TATGTGAATT GAGAGGTGTG GGCCCTGCAA CTGGGAGTCT CATATTGTCT TTAGTTACGA AGATTGCTCC CCACTTCACT CCTCCGTTCT TTAGTGATGA AAGTTTTCTC TACTACGTGG TTGATTCCAT TCGTCCAGGC ACTAAAATCA AATATAACGT CAAAGAGTAC TTTGAAGAGC TTTTGCCAGT GTATTACGGG ATTGTTTCTT TACACCCAGA ACTCACTTTC GATACGCTTG AAAAGGGTGC TTGGTCGTTG AAATCGTATG CTCTTCTAAG AATAGATAAA CTAATCAATG TCAAACTTCC TTTTGAAACC ACGGAAGATG ATCTCCAGAA GTTTAGTGAG GAAAGCACTG GTGTGTTGAA GAAAGAGCCA AAGAGAGAGC CAAAGGAAGT AGCGGCCATT AAGAGAAAGG CTGAAGCTGA ATCAAACCCA CCAACAAAGA GAACTAAAAG GACTACTAAA TAA
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Protein sequence | MPTSISILQE AASRLYPAII TELSSQSTKK YRNDKLSFSD LTAWRNEELP QKLKSLYDDK KEAYLTKDEL RLLLDWKLAN GKFRPTLPKL IDSNDANDVE LITKDGLGIL LDFVADKDAS FWKEVDEQDL QNYTTVVKKS LKKLCELRGV GPATGSLILS LVTKIAPHFT PPFFSDESFL YYVVDSIRPG TKIKYNVKEY FEELLPVYYG IVSLHPELTF DTLEKGAWSL KSYALLRIDK LINVKLPFET TEDDLQKFSE ESTGVLKKEP KREPKEVAAI KRKAEAESNP PTKRTKRTTK
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