Gene PICST_29697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29697 
Symbol 
ID4837315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp898383 
End bp899285 
Gene Length903 bp 
Protein Length300 aa 
Translation table12 
GC content41% 
IMG OID640388630 
Productpredicted protein 
Protein accessionXP_001382410 
Protein GI150863809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.121562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACGT CTATCAGCAT CCTCCAGGAG GCTGCTTCAC GGCTCTATCC TGCTATTATC 
ACAGAATTGT CCAGTCAATC GACAAAAAAG TACAGAAATG ATAAGCTCTC CTTCTCAGAT
CTCACTGCAT GGAGAAATGA AGAATTACCC CAGAAATTGA AGCTGTTGTA TGATGACAAG
AAGGAAGCTT ATCTTACAAA AGACGAGCTT AGACTTCTTC TTGACTGGAA ACTAGCCAAT
GGAAAGTTTC GTCCAACGTT GCCTAAGTTA ATCGATTCCA ACGATGCGAA CGATGTAGAA
TTGATTACCA AAGATGGTCT TGGTATACTT CTCGATTTCG TTGCTGATAA AGATGCAAGT
TTCTGGAAAG AAGTTGATGA ACAAGATTTG CAGAATTATA CTACTGTTGT GAAGAAATCG
CTCAAGAAAC TATGTGAATT GAGAGGTGTG GGCCCTGCAA CTGGGAGTCT CATATTGTCT
TTAGTTACGA AGATTGCTCC CCACTTCACT CCTCCGTTCT TTAGTGATGA AAGTTTTCTC
TACTACGTGG TTGATTCCAT TCGTCCAGGC ACTAAAATCA AATATAACGT CAAAGAGTAC
TTTGAAGAGC TTTTGCCAGT GTATTACGGG ATTGTTTCTT TACACCCAGA ACTCACTTTC
GATACGCTTG AAAAGGGTGC TTGGTCGTTG AAATCGTATG CTCTTCTAAG AATAGATAAA
CTAATCAATG TCAAACTTCC TTTTGAAACC ACGGAAGATG ATCTCCAGAA GTTTAGTGAG
GAAAGCACTG GTGTGTTGAA GAAAGAGCCA AAGAGAGAGC CAAAGGAAGT AGCGGCCATT
AAGAGAAAGG CTGAAGCTGA ATCAAACCCA CCAACAAAGA GAACTAAAAG GACTACTAAA
TAA
 
Protein sequence
MPTSISILQE AASRLYPAII TELSSQSTKK YRNDKLSFSD LTAWRNEELP QKLKSLYDDK 
KEAYLTKDEL RLLLDWKLAN GKFRPTLPKL IDSNDANDVE LITKDGLGIL LDFVADKDAS
FWKEVDEQDL QNYTTVVKKS LKKLCELRGV GPATGSLILS LVTKIAPHFT PPFFSDESFL
YYVVDSIRPG TKIKYNVKEY FEELLPVYYG IVSLHPELTF DTLEKGAWSL KSYALLRIDK
LINVKLPFET TEDDLQKFSE ESTGVLKKEP KREPKEVAAI KRKAEAESNP PTKRTKRTTK