Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29686 |
Symbol | |
ID | 4836869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 872114 |
End bp | 873478 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388184 |
Product | predicted protein |
Protein accession | XP_001382939 |
Protein GI | 150864207 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCG AAAAAGCGAC TTGGGAAGCA CTACTCAAGC ATCCCTTATA TACTTGTTTG TCTGACATAC CTCCAGACCT CGACCAGTTT ACCTGGGACG AGATTGATTT TGTGCTAGCG ACTTTGGACC GTGTCATCGG CCCAATTGCA CGTCTTCCTG TGCCCAGCAA GCATCTTCCC GTGTACCTCC AGTTCTGTGA TGGCTGGAAC GAGATCTGTG AACAGTCCCG GGAACTCTAC TTGGTTCATG ACATGCATAC CGAGAATGAA GAACTCAAGC TGCTTAACAC AGGTGACTTT GATGAAAGCG AAAAGAGAAT ATACGGCACT ATTAACAAGA ACGTGACTTT ATGGTTGAGA TTTCATTTGA ATTTGGATGA ATCCTACAAG AACGTCTACG AGTGTATTAA GTTCGCTACC CAGAAAGCAG AAATCGAAGA TAGAAGAATC AAAAATAACA TGAGTCTAGA AGATGATCGC AACGGTTTTA GGCTCGAAGA GTTGGCACAG TTCTTGCAGG TCTCAGTGAA GATGGAAGCT TGGATATACC TGCTTCCAAA GATTACTTAT GAAGACGAGT ACACCACTAA CAACTATGAT ATCGATTACT CTCTAAGCTA CATGGCATGG AAACAATTGT GTGAACAATG TCCGATTCTC GACAAGTTAT GTTTAATAGA TTGCCACAAT GTAGAAATCA GAACAAAGAC CCGAGAAAGT GTAACGGAAA GAGAGTTTTA CATGATGAAG AGAATTTCAG AAAAAGTCAT TCATGTGTTG AAGATGCGGT TGGGCCTTGA CAAATTTTGC GACACCATTT ATGAGTGCAT TAAGTTCATA AAAGACAGAG TAGACGGATC TTGTAAGTAC CAGCAGATTG AACTTCCAGA GGAGCTTTCC GACCAGATAT CAGCTCAACA ACGTCATTAC ATTAGGCATA TGGTTATCTA CACCAATGAA TTCTTAGACA AGCTTCCAGA TATTACTCCA GAGAGCCAGG AGTATGTACC ATTGCTTCAG GGCTGGACAT ACCTCTGTGA AAGGAACCCT ACCTTGTACA CCATGGTTGG CATGAATAGT GAAGACGACA GATTGAAAAA AATAGCCAAC GGCATCTTGT CTGGTAAAGA CCTTGAGATA CTCAAGACTA TAGACGCCAT CTTGGCCAGA GACTTCCAGA AAAAGCTTGG TTTAGATTTG AAGTTTAAAA ATCTATTTGA ATGTCAGCAG TACTTGGAAG AGAAATGTCT GGAAAAACTC ATAGAACAGA AGAAGGAACT TAATACAGGG ACTCAGAAAC AGATTAAAGA AGCACGACCT ATGATTAAAG AAATATTTGA AAGCAAAGAC GTATCAACAT TATAA
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Protein sequence | MRREKATWEA LLKHPLYTCL SDIPPDLDQF TWDEIDFVLA TLDRVIGPIA RLPVPSKHLP VYLQFCDGWN EICEQSRELY LVHDMHTENE ELKSLNTGDF DESEKRIYGT INKNVTLWLR FHLNLDESYK NVYECIKFAT QKAEIEDRRI KNNMSLEDDR NGFRLEELAQ FLQVSVKMEA WIYSLPKITY EDEYTTNNYD IDYSLSYMAW KQLCEQCPIL DKLCLIDCHN VEIRTKTRES VTEREFYMMK RISEKVIHVL KMRLGLDKFC DTIYECIKFI KDRVDGSCKY QQIELPEELS DQISAQQRHY IRHMVIYTNE FLDKLPDITP ESQEYVPLLQ GWTYLCERNP TLYTMVGMNS EDDRLKKIAN GILSGKDLEI LKTIDAILAR DFQKKLGLDL KFKNLFECQQ YLEEKCSEKL IEQKKELNTG TQKQIKEARP MIKEIFESKD VSTL
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